Query= MSMg01no211_e02.b1 MSMg01no211_e02.b1 CHROMAT_FILE:
MSMg01no211_e02.b1 PHD_FILE: MSMg01no211_e02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:36:14 2005
(356 letters)
>mm_chr5_77410731_77411486
Length = 756
Score = 619 bits (320), Expect = 0.0
Identities = 343/352 (97%), Gaps = 4/352 (1%)
Strand = Plus / Plus
Query: 5 gaattctctcccagtgcagtcctctcatgaaggaagagctgtggtgggcctgagacacgg 64
|||||||||||||||||||||||| ||| | |||||||||||||||||||||| ||||
Sbjct: 209 gaattctctcccagtgcagtcctcacat--a--aagagctgtggtgggcctgagagacgg 264
Query: 65 ctcagccggtgagggcattgactgcttttccagacaactcaggtttgattcccagcaccc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctcagccggtgagggcattgactgcttttccagacaactcaggtttgattcccagcaccc 324
Query: 125 acaggtgacttacagccatatataactccaggcgcacaggtgcagacaaacacaaatcta 184
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 325 acaggtgacttacagccatatataactccaggcgcacagatgcagacaaacacaaatcta 384
Query: 185 atatgaaaaattaaaaaataaaacttaggcctaagaacagatgtcagttgatagactgtt 244
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 385 atatgaaaaattaaaaaataaaacttaggcctaagaacagatgtcagttggtagactgtt 444
Query: 245 tgaaatctgctcaggaactagtttttgcttaaaaaaataggatttgcccaatgatgctaa 304
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 445 tgaaatctgctcaggaactagtttttgcttaaaaaaataggatttgctcaatgatgctaa 504
Query: 305 ttttaaaactgtttttctcctatagatctttgtcgccgttcattttcagaag 356
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttttaaaactgtttttctcctatagatctttgtcgccgttcattttcagaag 556
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 356
Length of database: 756
Length adjustment: 9
Effective length of query: 347
Effective length of database: 747
Effective search space: 259209
Effective search space used: 259209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no211_e02.g1 MSMg01no211_e02.g1 CHROMAT_FILE:
MSMg01no211_e02.g1 PHD_FILE: MSMg01no211_e02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:36:14 2005
(368 letters)
>mm_chr5_77577306_77578073
Length = 768
Score = 625 bits (323), Expect = 0.0
Identities = 332/335 (99%)
Strand = Plus / Minus
Query: 34 ttatttgaatttctggagttcagcttcttgagctctttgtatatattggatattagtccc 93
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 ttatttgaatttctggagttcagcttcttgagctctttgtatatattggatattagtccc 709
Query: 94 ctatcagatttaggactggtaaaaattctttcccaatctgttggtggcctttttgtctta 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 ctatcagatttaggactggtaaaaattctttcccaatctgttggtggcctttttgtctta 649
Query: 154 ttgacagtatcttttgcccttcagaagctttgcaattttatgaggtcccatttgtcgatt 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 648 ttgacagtatcttttgcccttcagaagctttgcaattttatgaggtcccatttgttgatt 589
Query: 214 cttgatcttacagcacaagctttgaacttgtggcagtccttctgcctcaacctcttgagt 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 cttgatcttacagcacaagctttgaacttgtggcagtccttctgcctcaacctcttgagt 529
Query: 274 atttgagtatcgtcatggtagacacaagtcaccatgatgggctgagacttattttttatt 333
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 528 atttgagtatcgtcatggtagacacaagtcaccatgatgggctgagacttatctttaatt 469
Query: 334 ccagtgattatccattactgtgtatgcattgaatg 368
|||||||||||||||||||||||||||||||||||
Sbjct: 468 ccagtgattatccattactgtgtatgcattgaatg 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
