Query= MSMg01no231_e04.b1 MSMg01no231_e04.b1 CHROMAT_FILE:
MSMg01no231_e04.b1 PHD_FILE: MSMg01no231_e04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:47:30 2005
(701 letters)
>mm_chr5_68431475_68432576
Length = 1102
Score = 1232 bits (637), Expect = 0.0
Identities = 683/699 (97%), Gaps = 3/699 (0%)
Strand = Plus / Minus
Query: 5 gaattcttcccgatgccatgcaagcaacggtgctaatatctgtcaaaggaaggtactcgt 64
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 902 gaattcttcccgatgccatgcaagcaacggtactaatatctgtcaaaggaaggtactcgt 843
Query: 65 gagattcccatgagggcacatgaactccatagtaccagaaatatgcaaataaggatggag 124
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 842 gagattcccatgagggcacgtgaactccatagtaccagaaatacgcaaataaggatggag 783
Query: 125 gctcagtttcatagcttagtactgggactctccaacctcttttagctttaacccatgagg 184
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 782 gttcagtttcatagcttagtactgggactctccaacctcttttagctttaacccatgaag 723
Query: 185 tcacttctctcaatctctagacccatcaacttcccttgagattgcagcccatctggctct 244
||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 722 tcacttctctcaatctctagagccatcaacttcccttgggattgcagcccatctggctct 663
Query: 245 cctcatcattactcctaagacaaccccacaagttccccacaagtctggtgctcagactct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 cctcatcattactcctaagacaaccccacaagttccccacaagtctggtgctcagactct 603
Query: 305 ctagctgccccttctcttttcccaaaaactgcatgggtcaaatcaagacactggctttca 364
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 602 ctagctgccccttctcttttcccaaaaactgtatggggcaaatcaagacactggctttca 543
Query: 365 ctattctattccacttcagactaaccaagcttctacaggctttccacaaagaaaagttat 424
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ctattctattccactgcagactaaccaagcttctacaggctttccacaaagaaaagttat 483
Query: 425 agaccaagaattttataaaacagaggaaaagaaaagatcaacttaactttttcacaattc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 agaccaagaattttataaaacagaggaaaagaaaagatcaacttaactttttcacaattc 423
Query: 485 caacttattgcttagaaattgacattgaatattgctattgtttattaaatttgtgaagtg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 caacttattgcttagaaattgacattgaatattgctattgtttattaaatttgtgaagtg 363
Query: 545 acaagaaaaattataacgttataaggtataatttgtcaaanattangcgaaataatgatt 604
|||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 362 acaagaaaaattataacgttataaggtataatttgtcaaaaattaggcgaaataatgatt 303
Query: 605 attgagaaaataaacttgagaaaggagacttgaaatcattacg-gtatttgtgcacataa 663
||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |
Sbjct: 302 attgagaaaataaacttgagaaaggagacttgaaatcatta-gtgtatttgtgcacatga 244
Query: 664 atgaactcttaattaaa-ttttatgcatattttatttag 701
||||||||||||||||| |||||||||||||||||||||
Sbjct: 243 atgaactcttaattaaaattttatgcatattttatttag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 701
Length of database: 1102
Length adjustment: 10
Effective length of query: 691
Effective length of database: 1092
Effective search space: 754572
Effective search space used: 754572
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no231_e04.g1 MSMg01no231_e04.g1 CHROMAT_FILE:
MSMg01no231_e04.g1 PHD_FILE: MSMg01no231_e04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:47:30 2005
(597 letters)
>mm_chr10_60892754_60893750
Length = 997
Score = 1139 bits (589), Expect = 0.0
Identities = 595/597 (99%)
Strand = Plus / Minus
Query: 1 cacttttttttgtggccatcagcaggattccttccttgatcatacccccatgggtctcgg 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 797 cacttttttttgtggccatcagcaggattccttccttgatcatatccccatgggtctcgg 738
Query: 61 ggtaaagtctgtgccagagcaccctgcttcctcctgaatggttgaccccagaggaggtag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 ggtaaagtctgtgccagagcaccctgcttcctcctgaatggttgaccccagaggaggtag 678
Query: 121 aagaaagttacagtgcctttaattcgccatgccctaaaaggaggaaaagaggagatgagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 aagaaagttacagtgcctttaattcgccatgccctaaaaggaggaaaagaggagatgagg 618
Query: 181 gaggtggaggcagtcacagccataagctattagaacagacttctatctgcttgtcctagg 240
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 617 gaggtggaggcagtcacagccataagctattaggacagacttctatctgcttgtcctagg 558
Query: 241 gagaggcggcaggaagtgaagattcccagatctacaccctcaactgccatcttctcaaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 gagaggcggcaggaagtgaagattcccagatctacaccctcaactgccatcttctcaaga 498
Query: 301 atgcttgctttgcaggtctctgaggcggccgctttaagcattgcttaccacttctgtttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 atgcttgctttgcaggtctctgaggcggccgctttaagcattgcttaccacttctgtttg 438
Query: 361 cctttagccacgaattgactaaaggaactgggggcattctggggagctgcttgtcaggca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 cctttagccacgaattgactaaaggaactgggggcattctggggagctgcttgtcaggca 378
Query: 421 ggtaacaaaggatgttagatgttaggttcctgagctgcagaacaaacagcagttcccttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ggtaacaaaggatgttagatgttaggttcctgagctgcagaacaaacagcagttcccttt 318
Query: 481 cccttctggtgatggtgtggaagccaggtgccaggtgagtcagtgcattggtcaaggtct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 cccttctggtgatggtgtggaagccaggtgccaggtgagtcagtgcattggtcaaggtct 258
Query: 541 cccacccagaagcagcgtctctgtgagccaggccagctcagcatgcagaggagcaaa 597
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 cccacccagaagcagcgtctctgtgagccaggccagctcagcatgcagaggagcaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 997
Length adjustment: 10
Effective length of query: 587
Effective length of database: 987
Effective search space: 579369
Effective search space used: 579369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
