TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAAGGCCCATACCTTAACATGATAAAAGCAATCTACAGCAAACCAG
TAGCCAACATCAAAGTAAATGGTAAGACCCTGGAAGCAATCCCACGAAAA
TCAGGGACTAGACAAGGCTGTCCACTCTCTCCCTACCTATTCAACATTGT
ACTTGAAGTCCTAGCCAGAGCAATTAGACAACAAAAGGAGACCAAGGGGA
TAAAATTTGAAAGGAAGAAGTCAAAATACCATTTTTTGCAGACGATATGA
TAGTATATATAAGTGACCCTAAAAATTCCACTAGAGAACTCCTAAGCCTG
ATAAACAGCTTCAGTGAAGTAGCTGGATATAAAATTAACTCAAACAAGTC
AATGGCATTTCTGTACACAAAGGATAAACAGGCTGAGAAAGAAATTAGGG
AAACAACACCCTTCTCAATAGTCACAAATAATATAAAATAACTTGGCATG
ACTCGAACTAAGGAAGTGAAAGATCTGTATGATAAGAACTTCAAGTCTCT
GAAGAAAGAAATTAAAGAGATCTCTCATGCTCATGGATTGGCGGGATCAA
TATAGTAAAAATGGCTATCTTGCCAAAAACAATCTACAGATTCAGTGCAA
TCCCCATCAAAATCCCAACTCAATTCTTCAACAAATTAGAAAGGGCAATC
GGCAGATTCATCTGGAATAACAAAAAACCTAGGATAGTGAAAACTCTTCT
CAAGGATAAAAAGN

ACGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXACTTTGTAGACCAGGCTGGCCTCGA
ACTTGGAAATCCACCTGCCTCTGCCTCATGAGTGCTGGGATTAAAGGCAT
ACTGCAAAATGTTTTGGCAAGCATTGCACATTATGAATGTTTAAAATTTT
CTGACAGATTTGTACACTCTCAGTGACAAAATTATATGACCTATAAGTAT
GTTCAAGTGAAATAATAGAAATATTTTATCACTAACTTTTATAAACATTG
ATAATATACTTTAAGCTTAGATGAACTGTTCTACTCATCAATATTCATTT
AGCTCCTCTTTTGTTCATTCACTAAGACTATACAGAAATTGGAAGACAAA
AATATAAAATCAAAACCAGCCTCGATAAGTTTTATAACTTTTCTGAAATT
CTTTAACATCTTAGCCCTCATAGCCTAGAAGTTCAGCTGGCAGCACATAT
TTATTGTGCTCCAAAACTGATTTCAGAAAGAAAAATGGATCTCAGAATCA
TCTTGAGAATTTGATGAAGTACAAGCAAGTTAGTATTGAAAAGATTTTGG
CAGATTTTTATGTAATATATCACATCTAACATATATTACATAGAAAGATA
ATATAGCATACATGCCAGTTCTATTTAGCAAGTGATTAAGTGTAAAGAGA
TTATAATTGTTTTAAAATTCTATTTTAAAGCTAGAACATTTCATAGATAA
TCTG

Query= MSMg01no233_c21.g1 MSMg01no233_c21.g1 CHROMAT_FILE:
MSMg01no233_c21.g1 PHD_FILE: MSMg01no233_c21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:51 2005
         (670 letters)



>mm_chr5_61515333_61516402
          Length = 1070

 Score = 1180 bits (610), Expect = 0.0
 Identities = 655/670 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   actttgtagaccaggctggcctcgaacttggaaatccacctgcctctgcctcatgagtgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 947 actttgtagaccaggctggcctcgaacttggaaatccacctgcctctgcctcatgagtgc 888

                                                                       
Query: 61  tgggattaaaggcatactgcaaaatgttttggcaagcattgcacattatgaatgtttaaa 120
           |||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||
Sbjct: 887 tgggattaaaggcatactgcaaaatgttttagcaagcattgtaaattatgaatgtttaaa 828

                                                                       
Query: 121 attttctgacagatttgtacactctcagtgacaaaattatatgacctataagtatgttca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827 attttctgacagatttgtacactctcagtgacaaaattatatgacctataagtatgttca 768

                                                                       
Query: 181 agtgaaataatagaaatattttatcactaacttttataaacattgataatatactttaag 240
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 767 agtgaaataatagaaatattgtatcactaacttttataaacattgataatatactttaag 708

                                                                       
Query: 241 cttagatgaactgttctactcatcaatattcatttagctcctcttttgttcattcactaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 707 cttagatgaactgttctactcatcaatattcatttagctcctcttttgtgcattcactaa 648

                                                                       
Query: 301 gactatacagaaattggaagacaaaaatataaaatcaaaaccagcctcgataagttttat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 gactatacagaaattggaagacaaaaatataaaatcaaaaccagcctcgataagttttat 588

                                                                       
Query: 361 aacttttctgaaattctttaacatcttagccctcatagcctagaagttcagctggcagca 420
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| 
Sbjct: 587 aacttttctgaaattctttatcatcttagccctcatagcctagaagttcagctggcagcc 528

                                                                       
Query: 421 catatttattgtgctccaaaactgatttcagaaagaaaaatggatctcagaatcatcttg 480
           |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 527 catatttattgtgctccaaaactgatttcagaaagagaaatggatctcagagtcatcttg 468

                                                                       
Query: 481 agaatttgatgaagtacaagcaagttagtattgaaaagattttggcagatttttatgtaa 540
           |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 467 agaatttgatgaagtataagcaagttagtgttgaaaagattttggcagatttttatgtaa 408

                                                                       
Query: 541 tatatcacatctaacatatattacatagaaagataatatagcatacatgccagttctatt 600
           |||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 407 tatatcacatataacatatattacatagaaagataatatagcatatataccagttctatt 348

                                                                       
Query: 601 tagcaagtgattaagtgtaaagagattataattgttttaaaattctattttaaagctaga 660
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 tagcaagtgattaagtgtgaagagattataattgttttaaaattctattttaaagctaga 288

                     
Query: 661 acatttcata 670
           ||||||||||
Sbjct: 287 acatttcata 278


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1070
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1060
Effective search space:   699600
Effective search space used:   699600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)