Query= MSMg01no236_o09.b1 MSMg01no236_o09.b1 CHROMAT_FILE:
MSMg01no236_o09.b1 PHD_FILE: MSMg01no236_o09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:34 2005
(592 letters)
>mm_chr5_3497622_3498620
Length = 999
Score = 1069 bits (553), Expect = 0.0
Identities = 585/599 (97%), Gaps = 7/599 (1%)
Strand = Plus / Minus
Query: 1 aagggctggttgaaaacaccgcttccctgctgtggcagatggaatgcttcgggagtactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 aagggctggttgaaaacaccgcttccctgctgtggcagatggaatgcttcgggagtactt 740
Query: 61 ttcaaacagccctc--ggttttgtaaggtcctctgg-----actcacccagccaacttct 113
||||||||| |||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 739 ttcaaacagtcctcagggttttgtaaggtcctctggaccttactcacccagccaacttct 680
Query: 114 cagtactctgaattgggatcaccaagaggactgcctcctcacgttcctgaaactcctcat 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 cagtactctgaattgggatcaccaagaggactgcctcctcacgttcctgaaactcctcat 620
Query: 174 tcttttggtacaccctaatggagagatgccagcctgaaaccctctaaagaaaagcacaaa 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tcttttggtacaccctaatggagagatgccagcctgaaaccctctaaagaaaagcacaaa 560
Query: 234 ttttacaacaggcgtctcttcgcgatgtctaagaggcagaagtatgatcgagtgctgtct 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 cattacaacaggcgtctcttcgcgatgtctaagaggcagaagtatgatcgagtgctgtct 500
Query: 294 ctggaggactcagcatgaaggctgatgtataggtacacctgacttccccctcagataatg 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ctggaggactcagcatgaaggctgatgtataggtacacctgacttccccctcagataatg 440
Query: 354 cccacgtttcagtggtctcaggggaatgttaggaaactgacaacattctcaaaggccagt 413
|||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 439 cccacgtttcagtggtttcaggggaatgttaggaaactgacaatattctcaaaggccagt 380
Query: 414 tattgctttcccccaagagcaacttccttgctcagagtatagtggatggcgtggtttggt 473
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 379 tattgctttcccccaagagcaacttccttgctcagagtatagtggacggcgtggtttggt 320
Query: 474 gcttacaagctttcttttcttactggaaaactggagtcactgccccaggcacccccgtca 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gcttacaagctttcttttcttactggaaaactggagtcactgccccaggcacccccgtca 260
Query: 534 cattagcctgatgcctcatgtgcacatcaaactgtctaggcttaggccccttattcagt 592
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 cgttagcctgatgcctcatgtgcacatcaaactgtctaggcttaggccccttattcagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 999
Length adjustment: 10
Effective length of query: 582
Effective length of database: 989
Effective search space: 575598
Effective search space used: 575598
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no236_o09.g1 MSMg01no236_o09.g1 CHROMAT_FILE:
MSMg01no236_o09.g1 PHD_FILE: MSMg01no236_o09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:34 2005
(294 letters)
>mm_chr5_3316158_3316851
Length = 694
Score = 553 bits (286), Expect = e-162
Identities = 292/294 (99%)
Strand = Plus / Minus
Query: 1 ctcttgaactttctatttgacattgcacaatgatttcctttgtcacaaagaaaccctccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ctcttgaactttctatttgacattgcacaatgatttcctttgtcacaaagaaaccctccc 435
Query: 61 ttgcagaagccttttccacagctggccttcatcatttcttgataaatattttagtctttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 ttgcagaagccttttccacagctggccttcatcatttcttgataaatattttagtctttt 375
Query: 121 tccactttatttttctgttataataatggcccaatcgaatcatttatctttgctccccta 180
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 374 tccactttatttttctgttataataatgacccaatcgaatcatttatctttgctcccctg 315
Query: 181 caagtgtttgcaatgttgtatgtgagaagtgtcttttgcagttctctcttctcttcttgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 caagtgtttgcaatgttgtatgtgagaagtgtcttttgcagttctctcttctcttcttgc 255
Query: 241 taggtgttttcagtgacttagcctcaattatcgatggctattcaaattaagtgt 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 taggtgttttcagtgacttagcctcaattatcgatggctattcaaattaagtgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
