Query= MSMg01no237_o20.b1 MSMg01no237_o20.b1 CHROMAT_FILE:
MSMg01no237_o20.b1 PHD_FILE: MSMg01no237_o20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:55:52 2005
(329 letters)
>mm_chr5_74891518_74892246
Length = 729
Score = 582 bits (301), Expect = e-171
Identities = 322/329 (97%)
Strand = Plus / Plus
Query: 1 acattgtcttatactagaatgagttttcatttcttcctataggatgttcttatttggggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acattgtcttatactagaatgagttttcatttcttcctataggatgttcttatttggggc 260
Query: 61 tttattcacatttattcatattagccaacactttttttgagtgcctactatgcattctgc 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 tttattcacatttattcatattagccaacacattttttgagtgcctactatgcattctgc 320
Query: 121 gtgcctactatgtaccaagcacttctcttgggtcttggagttttagaccattccttagaa 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgcctactatgtaccaaacacttctcttgggtcttggagttttagaccattccttagaa 380
Query: 181 atcatcccatctagttttcacaagaagaaaactatcatgatgataaatcaaaaagacctt 240
||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 381 atcatcccatctacttttcacaagaaaaaaactatcatgatgctaaatcaaaaagacctt 440
Query: 241 gatcaagccaggcatggtggcacacacctttaatcccagccttctggaggcagaagcagg 300
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 441 gatcaagccaggcatggtggcacacacctttaatcccagccttccggaggcagaagcagg 500
Query: 301 aggttctctgtgagtctgagttcaaggcc 329
||| |||||||||||||||||||||||||
Sbjct: 501 aggatctctgtgagtctgagttcaaggcc 529
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 729
Length adjustment: 9
Effective length of query: 320
Effective length of database: 720
Effective search space: 230400
Effective search space used: 230400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no237_o20.g1 MSMg01no237_o20.g1 CHROMAT_FILE:
MSMg01no237_o20.g1 PHD_FILE: MSMg01no237_o20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:55:52 2005
(291 letters)
>mm_chr5_75009010_75009699
Length = 690
Score = 514 bits (266), Expect = e-150
Identities = 286/294 (97%), Gaps = 4/294 (1%)
Strand = Plus / Minus
Query: 1 aagataggctagcaaaggaagagcatgcaagcactgactcggtaagtcaggcctgtgcat 60
|||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||
Sbjct: 371 aagataggctagcaaaggaagagcatgcaagcactgactc-gtaagttagggctgtgcat 313
Query: 61 gaagctcaggcttcctctgttgggccattcagttgcatttcctagatgggcatggaatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gaagctcaggcttcctctgttgggccattcagttgcatttcctagatgggcatggaatga 253
Query: 121 acagttccctgagctagccgtccattgcgagatttatcacttt---aaaaaaaaaaaaga 177
||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 252 acagttccccgagctagccgtccattgcgagatttatcactttaaaaaaaaaaaaaaaga 193
Query: 178 tttatttctttactgtaagtacactgtagctgtcttcagacacaccataagagggcgtca 237
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 tttatttctttaatgtaagtacactgtagctgtcttcagacacaccataagagggcgtca 133
Query: 238 gatctcattacggatggttgtgagccaccatgtggttgctggaaattgaactca 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 gatctcattacggatggttgtgagccaccatgtggttgctggaaattgaactca 79
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 690
Length adjustment: 9
Effective length of query: 282
Effective length of database: 681
Effective search space: 192042
Effective search space used: 192042
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
