TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTTTGTTTAGCTCTGTACCCCATCTTTAATAGGGATACATGGTGCTCT
GGAGTGTAACTTCTTGAGTTCTTTGCATATATTGGATATTAGCCCTCTAA
TGGATATAGGATTAGTAAAGATCTTTTCCCAATCTGTTGGTTCCATTATT
TCTTAGGAAGGCTCTTATCTCTCCTTGCTGCTTACTCTCTAAGTCATTCT
TACATTCAGAAACTCAGGTGACAGTAGATGCTGGTGAGGTTGTGGAGAAA
GAGAAACACTCCTCCATTGCTGGTGGGATTGCAAGTGGTACAACCACTCT
GGAAATCAGATTGGTGGTTCTTCAGAAAATTGGACATAGTACTACCTGCG
GACCCACTAATACCACTCCTGGACACTTACCCAGAAGATGCTCCCACATG
TAATAAGGACACATGTTCTACTATGGTCATAGCAGCCTTATTTTTTTTAT
CCGGGGGGGAAAACCATCCCTCAAGAAGNNNNNNNNNNNNGGNTTTTACC
AAAAAAGGGGGGGGTGTTTTCCCAGGGGGGGATACTAATTTTTGTTTTTT
TTTAAAAAATGGGGTTTTTTTGAAAAATTTTTATTTCTTTTTAGGGGGAG
GAGACCNCGGAAAAAAAAAAAAAGTTCTTCCCGCGGGCGGGGCGGGCGCT
TCTTTTTTTTTTTCTACCAAAAGAAAATACCCCNTGN

GATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCAGTTAGGGGAGTGGGCCAGAATGG
ATCCAACTGGGAACCTCTGAAAACTGTCTCTCCTTTCCCCTCTGCCAACT
GGTCAGGCTTCACATTTAAAGTATCAAACACACACACACACACACACACA
CACACACACACACACACACACACACACACACACAATGGAGAAGCAGGCAG
AAAGAGAGAATGAACCCTTTTGCAAATTTTTAAAAATAGTAATTACAAGA
AAACTAAACAGATTTACATTTGTTTATCATGTAAGTGTGTGTTTATAGAG
TTTGCCATACAGATAGGATTTATTTTTAACATGAGCCCATTTGATTTCGC
CAGAAAGACCATATGCAGTTTTCTTCAGCACTTGCACACAATAAATACAT
GTCAATATTTTCCACTGTGAGTGATTTTCATGCAAGCCAAACACCTGCTT
ATGGCTTTAGTTTGTCACTGGAAGCAGTTTCTGAAAATTGTTATGTAAGT
CTCTATTGGTCCAGTGTTTAAGCCACATGGTGTTCATTTCAAAGTCCCTT
CTTTTATAGACGAGCTCAGTATAGGATTCTGTACTAGTGACTTCAATAAT
GTATTCACTCAGTAAATTTGCATTAGGCAATTACCATACCTTCCATAGCT
CAGGGCTAACATCCTTGGGTTCCTCTGCATTGGACATTAATGCTCCCACC
TGGATTTT

Query= MSMg01no260_b02.g1 MSMg01no260_b02.g1 CHROMAT_FILE:
MSMg01no260_b02.g1 PHD_FILE: MSMg01no260_b02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:56:03 2005
         (532 letters)



>mm_chr5_49040761_49041693
          Length = 933

 Score =  980 bits (507), Expect = 0.0
 Identities = 524/533 (98%), Gaps = 7/533 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   cagttaggggagtgggccagaatggatccaactgggaacctctgaaaactgtctctcctt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 886 cagttaggggagtgggccagaatggatccaactgggaacctctgaaaactgtctctcctt 827

                                                                       
Query: 61  tcccctctgccaactggtcaggcttcacatttaaagtatcaaacacacacacacacacac 120
           ||||||||||||||||||||||||||||||||||||||||||      ||||||| ||||
Sbjct: 826 tcccctctgccaactggtcaggcttcacatttaaagtatcaa------acacacatacac 773

                                                                       
Query: 121 acacacacacacacacacacacacacacacacacacacaatggagaagcaggcagaaaga 180
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 772 acacacacacacacacacacatacacacacacacacacaatggagaagcaggcagaaaga 713

                                                                       
Query: 181 gagaatgaacccttttgcaaatttttaaaaatagtaattacaagaaaactaaa-cagatt 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 712 gagaatgaacccttttgcaaatttttaaaaatagtaattacaagaaaactaaatcagatt 653

                                                                       
Query: 240 tacatttgtttatcatgtaagtgtgtgtttatagagtttgccatacagataggatttatt 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 tacatttgtttatcatgtaagtgtgtgtttatagagtttgccatacagataggatttatt 593

                                                                       
Query: 300 tttaacatgagcccatttgatttcgccagaaagaccatatgcagttttcttcagcacttg 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 tttaacatgagcccatttgatttcgccagaaagaccatatgcagttttcttcagcacttg 533

                                                                       
Query: 360 cacacaataaatacatgtcaatattttccactgtgagtgattttcatgcaagccaaacac 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 cacacaataaatacatgtcaatattttccactgtgagtgattttcatgcaagccaaacac 473

                                                                       
Query: 420 ctgcttatggctttagtttgtcactggaagcagtttctgaaaattgttatgtaagtctct 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 ctgcttatggctttagtttgtcactggaagcagtttctgaaaattgttatgtaagtctct 413

                                                                
Query: 480 attggtccagtgtttaagccacatggtgttcatttcaaagtcccttcttttat 532
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 attggtccagtgtttaagccacatggtgttcatttcaaagtcccttcttttat 360


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 76
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 933
Length adjustment: 10
Effective length of query: 522
Effective length of database: 923
Effective search space:   481806
Effective search space used:   481806
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)