CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGACGGGGCGGA
ATTCATTTATTCATGACGANCACAGATATGTGAGATGAAGATCTATAAAT
CAGTAATATGTAAAATTCTAGGATTCTTCTATTTCATCATGGAGATGAGG
AGTTGGGAAAGAAGTTCCATCCCTAGCTTATGAGTTATTAATAGGCAATT
GACAGCTGTTTGGAAGGGTATTCAATTCCCTACATTGCAGCTCCTGGTAG
GTAAACTTTTCTGAAGTTAAGTCTAGGCATCCATAAGTATATGAGTAACA
TAAACTTTTCTTGANATATTAATATAGGTANTAGTTTGNAATCTCATCAG
CAATGGAGGAGTGTTTTTCTTTCCCCCCCCACCCCTGCCAGCATCTGCTC
TCATTTGAATCTTAGCCACCCCGACTGGAGAGAGAAGAACTATCAGGGGG
GAGGTGATTTGCATTTCCCTGATGACTAAGGATGTTGAACATTTTATTAG
GTGCTTCTTGGTCATTCGATATTCCTCAGTTGAAAATTCTTTGTGTATTT
CTGTACCCCATTTTAATAGGGCTATTTGATTCTCTGGCATCTAACTTCTT
GAGTCCTTTGCATTTATTGGATACTAGCCCTCTAAACATGTGCTAGTTAA
AGATCTTTTCCCAACCTTTTTTGTCATTTTGTCCAATTGAGAGTGTCCTT
TGCCTTACAGAAGCTTTGCAATTTTATGAGATCCTATTTTTCTATTGTTT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCAAGAGAAATCCTGGAAATACTAATGT
ACTTTTTGTTGTTACAGGATTTCAATTTGGCCTTGCAATCACCAGAGAAG
GACCAAGCCCATGAGACAAAAATATGTATCCTAGAGAGATTTTAGAAAAT
AGTATAAAACTCCTATAAATATATATTAGTATTTCCTATCACTTTGACAG
TAAGCATTACTTCTCTTTGTTATAAACTCTGCATATACTCAATACTGCAT
TGATGTATCTCATCTAAATACTTTTCATGGAGATCAAAAGGACAGGGGGA
GGATGTCCAGAGCCAGATACTTGGGGAACTAAGCAATCATGAACATACTA
CATACTTCTTAAGAATTTGGGCAAAATTCTGTTTGAAACCAACTGTCTTC
TAAACCCAGAAAACATGTCTACAGTAATAGAAGAAAAGGAATCTAATTTG
ATCATGAAATAAGTGTGAAACCAGAAGAACATTATTCCCATGACAGACAA
TCTGCAAAGTATAATAAAAACAAACAAATCATGTTTCCATATATGGCCAA
GTAAGTAAAACCCATAAAATACATGTTCGGAGAATAAACAACAAATCCTC
AAATAAGAGGACTTGGCAGCAGTTCTTGCCACATTTCAACCTAATTTCAC
TTTGTAGTATCTTAGACGACCATCTGTGTGAACTAATTGGTTTCTTC

Query= MSMg01no260_j23.g1 MSMg01no260_j23.g1 CHROMAT_FILE:
MSMg01no260_j23.g1 PHD_FILE: MSMg01no260_j23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:56:46 2005
         (674 letters)



>mm_chr5_62410148_62411222
          Length = 1075

 Score = 1243 bits (643), Expect = 0.0
 Identities = 667/675 (98%), Gaps = 1/675 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   caagagaaatcctggaaatactaatgtactttttgttgttacaggatttcaatttggcct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caagagaaatcctggaaatactaatgtactttttgttgttacaggatttcaatttggcct 260

                                                                       
Query: 61  tgcaatcaccagagaaggaccaagcccatgagacaaaaatatgtatcctagagagatttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcaatcaccagagaaggaccaagcccatgagacaaaaatatgtatcctagagagatttt 320

                                                                       
Query: 121 agaaaatagtataaaactcctataaatatatattagtatttcctatcactttgacagtaa 180
           |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 321 agaaaatagtataaaactcctataaatatacatcagtatttcctatcactttgacagtaa 380

                                                                       
Query: 181 gcattacttctctttgttataaactctgcatatactcaatactgcattgatgtatctcat 240
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 gcattacttctctttgttataaactctgcacatactcaatactgcattgatgtatctcat 440

                                                                       
Query: 241 ctaaatacttttcatggagatcaaaaggacaggggg-aggatgtccagagccagatactt 299
           |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 441 ctaaatacttttcatggagatcaaaaggacagggggaagtatgtccagagccagatactt 500

                                                                       
Query: 300 ggggaactaagcaatcatgaacatactacatacttcttaagaatttgggcaaaattctgt 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggggaactaagcaatcatgaacatactacatacttcttaagaatttgggcaaaattctgt 560

                                                                       
Query: 360 ttgaaaccaactgtcttctaaacccagaaaacatgtctacagtaatagaagaaaaggaat 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttgaaaccaactgtcttctaaacccagaaaacatgtctacagtaatagaagaaaaggaat 620

                                                                       
Query: 420 ctaatttgatcatgaaataagtgtgaaaccagaagaacattattcccatgacagacaatc 479
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctaatttcatcatgaaataagtgtgaaaccagaagaacattattcccatgacagacaatc 680

                                                                       
Query: 480 tgcaaagtataataaaaacaaacaaatcatgtttccatatatggccaagtaagtaaaacc 539
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgcaaagtatgataaaaacaaacaaatcatgtttccatatatggccaagtaagtaaaacc 740

                                                                       
Query: 540 cataaaatacatgttcggagaataaacaacaaatcctcaaataagaggacttggcagcag 599
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cgtaaaatacatgttcggagaataaacaacaaatcctcaaataagaggacttggcagcag 800

                                                                       
Query: 600 ttcttgccacatttcaacctaatttcactttgtagtatcttagacgaccatctgtgtgaa 659
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ttcttgccacatttcaacctaatttcactttgtagtatcttagacgaccatctgtgtgaa 860

                          
Query: 660 ctaattggtttcttc 674
           |||||||||||||||
Sbjct: 861 ctaattggtttcttc 875


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1075
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1065
Effective search space:   707160
Effective search space used:   707160
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)