Query= MSMg01no260_n10.b1 MSMg01no260_n10.b1 CHROMAT_FILE:
MSMg01no260_n10.b1 PHD_FILE: MSMg01no260_n10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:03 2005
(541 letters)
>mm_chr5_82128953_82129893
Length = 941
Score = 994 bits (514), Expect = 0.0
Identities = 534/541 (98%)
Strand = Plus / Plus
Query: 1 tgaggattattgagacctatcctttgatgtagagatgtagaggaagatgatggaactgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgaggattattgagacctatcctttgatgtagagatgtagaggaagatgatggaactgcc 260
Query: 61 catacttgttcagagagggccttatcaaagaaacatcttgatctgtaggaggaatgtgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catacttgttcagagagggccttatcaaagaaacatcttgatctgtaggaggaatgtgat 320
Query: 121 gtagttagctaggtgatgtgtgtagaatgagttggccataatattgtaacatttctttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 gtagttagctaggtgatgtgtgtagaatgagttggccataatattgtaacatttccttca 380
Query: 181 ctttatctgagtattacactctttgtttctttcttctgcatctggatttagttagcttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctttatctgagtattacactctttgtttctttcttctgcatctggatttagttagcttcc 440
Query: 241 tttcctggttgttcctcacctgcatgccctcttttcatcacttggagcaaaagtagttta 300
|||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 441 tttcctggttgttcctcacctgtatgccctctcttcatcacttggagcaaaagtagttta 500
Query: 301 gtaaatcactgcttttcccctggctgacctcatgtagtcatatggntcccaaacatcatt 360
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 501 gtaaatcactgcttttcccctggctgacctcatgtagtcatatggtttttaaacatcatt 560
Query: 361 taccaattgctaggtttcaatgtttatttctagactcatagatctaaccagtgacttgac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taccaattgctaggtttcaatgtttatttctagactcatagatctaaccagtgacttgac 620
Query: 421 ataactacaggtatttcttgacttgggttgtaatcaaatcccaattctgtcactgtaagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ataactacaggtatttcttgacttgggttgtaatcaaatcccaattctgtcactgtaagt 680
Query: 481 taaaatgccgtaagtcataaatggattcaatacatggagcataccaaacttttcatctca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 taaaatgccgtaagtcataaatggattcaatacatggagcataccaaacttttcatctca 740
Query: 541 g 541
|
Sbjct: 741 g 741
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 941
Length adjustment: 10
Effective length of query: 531
Effective length of database: 931
Effective search space: 494361
Effective search space used: 494361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no260_n10.g1 MSMg01no260_n10.g1 CHROMAT_FILE:
MSMg01no260_n10.g1 PHD_FILE: MSMg01no260_n10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:03 2005
(341 letters)
>mm_chr5_82270592_82271332
Length = 741
Score = 617 bits (319), Expect = 0.0
Identities = 334/341 (97%), Gaps = 6/341 (1%)
Strand = Plus / Minus
Query: 1 tggattttacccctaacatctggaaaagcatctttgtactactcagggaccatgacacag 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 482 tggattttacccctaacatctggaaaagcatctttgtactactcagggaccatgccacag 423
Query: 61 tgaaagtggccatgacaggaaaaataacatgatttagagagaatgggggatttatgtcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tgaaagtggccatgacaggaaaaataacatgatttagagagaatgggggatttatgtcaa 363
Query: 121 aatgccttggttgaattcatgccatacttgtatgtactcagaaaggaaagaaataggctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aatgccttggttgaattcatgccatacttgtatgtactcagaaaggaaagaaataggctg 303
Query: 181 aatccctaactcttggcatactacatttaatgatgtgtatttctggtttattagggtata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aatccctaactcttggcatactacatttaatgatgtgtatttctggtttattagggtata 243
Query: 241 gatgaatctaagaggcttaaaaccttggcctggtagaactaatatttatttatttattta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gatgaatctaagaggcttaaaaccttggcctggtagaactaatatttatttatttattta 183
Query: 301 tttatttatttattta--tttat---tta-tttatttattt 335
|||||||||||||||| ||||| ||| |||||||||||
Sbjct: 182 tttatttatttatttatttttattggttattttatttattt 142
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
