TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAATCCGCGG
AATTCAGCAATGGTACCCACAGGTTTAAGGAGAGAAACCACTTCAGGGTC
TAGTGGTTTCTAGACCACCAACACATTTTTGGGATCCAGCAAAAATATGA
AGACATTGATGAAATATAAGACCTAGGTAACTGTTACATATTGGAATATG
ACAAAACAAAGAAATGGAGGATAAAGAGCCAATGAAAAACCACAAGGAAT
ACATATAGATACAGGACAGGATCTCACACACACAAGAATCCAATCAAAAC
ACAAAATTGTTAGCCCTAATATATGACCAAAGGTCCCAAAGGGGATAAAA
ACTCTGTAGAAGTCCAACAGCGTAAATTAACCGGGACCTTTGGGGCTGAG
ACTGAAACCCCAACCAAAGAGAACATGGGCTGGGCATAAGCCTCCCCACA
CAGATGTAGGAGATTTTTAGCTTGGTCTTCACGTCGGTCCCCTAACAACT
GGACTGAAGGCCACTTCAGAAGCCATTGCCTGTTTGTGGGGTGTGTTCTT
CTAGCTGAGCTGCTTTGCCTGGCCTCAGTGGGAGAGGATATGCCCTGCCT
TAAAAATACTAAAAGTACCAGGGTGTGGGGATACCCAGGGAACTTCCACC
TACTCAGAGAACATGGTAAGAAGGTGCCTAGAAGTAGTGTACTAGGGTCT
GACCTCGAAAAGACAGTTAGTGGGGGATTTAAA

CATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXATATGTTCATCAGTTCTGCTGTGTTTTA
GAAGGCCTGGTATCTTCAGTTAAAGGATGGCTGTTATGAAGATAGTAGAG
CAAGTGTCTTTGTGTTATTGTGGGTCCTCTTTGGCTTTCTGTCTGGGAGT
GGTAAAGCTGGTTCTAGAAGATAGATTGAATCTCAAATTTTTGAGAAACT
GCCAGATTGATCTTACAAGTGGTTGTGCAAGTTTAAAGTCTCTTCAACAA
TAGAGATTTGTTCCCCTTGTTCCATAACCCCCTCACCATGAGCTGTGAAA
TGAGGTTGAGAGCTCTGATTCAGTCACTGAAAAGGTTGCATGTTACAAAT
AGAATTAAAAGGGTGGAGTTTAACCATCTAATCCAATTCCAGTTTGGGAT
TGTAGGGTATGGCTCTAAAAGGGAGGGTGAGCAGAGAGGCATATAAAGGC
TTCAGTGGAGCCAGAGAACACATTCAGAGAACTGCAACCTGAATAACTGC
CTCATTTGGCCAGCACTGAGAGACCTATCTACAGTGTTCAGAACTAGTAG
GTAATGATATTCCCCTGGGTCATGGGGTTGGATGTAGAGACATTTAGACT
CCAAGTTATGACAAAAATGTTAATTTCTATCTTCTTGGTAGAACACCTTG
AACACCTGGATTTAACTCCTAATGAAAGTN

Query= MSMg01no261_e22.b1 MSMg01no261_e22.b1 CHROMAT_FILE:
MSMg01no261_e22.b1 PHD_FILE: MSMg01no261_e22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:40 2005
         (626 letters)



>mm_chr5_93918524_93919549
          Length = 1026

 Score = 1098 bits (568), Expect = 0.0
 Identities = 613/630 (97%), Gaps = 4/630 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aggtttaaggagagaaaccacttcagggtctagtggtttctagaccaccaacacattttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggtttaaggagagaaaccacttcagggtctagtggtttctagaccaccaacacattttt 260

                                                                       
Query: 61  gggatccagcaaaaatatgaagacattgatgaaatataagacctaggtaactgttacata 120
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 gggatccagcaaaaatatgaagacattgatgaaatataagtcctaggtaactgttacata 320

                                                                       
Query: 121 ttggaatatgacaaaacaaagaaatggaggataaagagccaatgaaaaaccacaaggaat 180
           ||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 321 ttgtagtatgacaaaacaaagaaatggaggataaagaaccaatgaaaaaccacaaggaat 380

                                                                       
Query: 181 acatatagatacaggacaggatctcacacacacaagaatccaatcaaaacacaaaattgt 240
           |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| 
Sbjct: 381 acatatagatacaggacaggatctcacacacacaagaatccaataaaaatacaaaattgg 440

                                                                       
Query: 241 tagccctaatatatgaccaaaggtcccaaaggggataaaaactctgtagaagtccaacag 300
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tagccctaatatatgagcaaaggtcccaaaggggataaaaactctgtagaagtccaacag 500

                                                                       
Query: 301 cgtaaattaaccgggacctttggggct----gagactgaaaccccaaccaaagagaacat 356
           |||||||||||||||||||||||||||    || ||||||||||||||||||||||||||
Sbjct: 501 cgtaaattaaccgggacctttggggctctcagaaactgaaaccccaaccaaagagaacat 560

                                                                       
Query: 357 gggctgggcataagcctccccacacagatgtaggagatttttagcttggtcttcacgtcg 416
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gggctgggcataggcctccccacacagatgtaggagatttttagcttggtcttcacgtcg 620

                                                                       
Query: 417 gtcccctaacaactggactgaaggccacttcagaagccattgcctgtttgtggggtgtgt 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtcccctaacaactggactgaaggccacttcagaagccattgcctgtttgtggggtgtgt 680

                                                                       
Query: 477 tcttctagctgagctgctttgcctggcctcagtgggagaggatatgccctgccttaaaaa 536
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tcttctagctgagctgctttgcctggcctcagtgggagaggatatgccctgccttaaaaa 740

                                                                       
Query: 537 tactaaaagtaccagggtgtggggatacccagggaacttccacctactcagagaacatgg 596
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 741 tactaaaagtaccagggtgtggggataccaagggaacttccacctactcagagaacatgg 800

                                         
Query: 597 taagaaggtgcctagaagtagtgtactagg 626
           ||||||||| ||||||||||||| ||||||
Sbjct: 801 taagaaggtacctagaagtagtgaactagg 830


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1026
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1016
Effective search space:   625856
Effective search space used:   625856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)