TCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTTTTACTAATTGCCGGAATCTGGGGTAGGGTCCAGTGTCTGGT
GAGGCAGTCAGTCCCCACTCAGTCAGCCTTCAAGGCTATGAGTATCTACA
CTGCACAGCAAAGTTTCACCTCGAAGAACAAGGGGACACGGAGTCCTGGG
CAGAGGTAGTCAGGGGTACTCCTGAAAACAGCCAGTCAGCAGTTCCTAAA
AGTTTGTGCTGGCTGGGGAGAGGTGGAGACAGGAAGGAGGTAGCTTCTGG
TGGAGCGTGGCTGGTAACAGAAGCGACATACACCCAATCTCAGCACTTAG
GCAATAGAGGCAGGAGGATAGAGAGCTCAAAATGAGCCTGGGCTTCATAG
CAAGACTCTGTCTCAGTAAATTAGTATTTAAGTATTTTTAAAAAATAGTG
GCACACAGAAGAGAAACCTTGGGGGTGCAGGAGTGGTAGGACAGGAGTGC
TGCCCTGTAACAGTCTTCCCTGAGGCTCAACAGGCAGGGCAGTCACCCTC
AGCACTGCAAGGCATGGTGGGCAATGAATCAGGACAGGACTCACTTTCCA
GGGTCCCTACTAGCTTTCTTGTTCAGCATCCACCCTTTGCTCCTCTACAG
GTATCAGCGAAGCCCAGCATCCCTGGGCCTCAGCCTTGGGGGTGCCAGTC
CTTACCCAGGGACCTTGATCCCN

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXACGCAGTTGAATCCTTCTCAACAGT
CTGTTTTACGGGAACACTTATGACCGTGACCCGCAGTTCTGGTTCCGGAA
TGAGGGATCTTCCTTGCGCCGGTGATGGTAACCGTCCCAGGTTTTCTTGT
CCCGGGTTATCTCGTCCCAGGTCTTCTCGTCTCGGGTTTCGGCACAAACT
CTTACACGCATTCACGAAACTGGCCAGGAAGAATGCAACAAACCGGAATC
TTCTGCGGCAAAAGCTTTATTGCTTACATCTTCAGGAGCCAGAGCAAGAG
TGCAAGAGTGCAAGAAAAAGAACAAGAACAAGAAAGCAAGAGAGAGCAAG
AAAGCAAGAAAAAGAACAAGAAAAAGAAAGCAAGAGAAAGAATGGCAAAA
CCCTGTCCCTCTTAAGGAGAATTATCCTCCGCCTAGGACGTATTACTCCC
TGATTGGCTGCAGCCCATTGGCCCAATTGTCATCATGGGAAAGGCAGAAC
ACATGGCGGGAAAACTGCCCCTGCACGTGTGCAGACTATGTTTACCACTT
AGAACACAGCTGTCAGCGCCATCTTATAATGGCAAATGTGAGGGCGGCTC
CTCACAAAATACGGAAAATGAGAAATACACACGTTAGGACATGAAATATG
GCGAGGAAAACTTGAAAAGGTG

Query= MSMg01no261_m22.b1 MSMg01no261_m22.b1 CHROMAT_FILE:
MSMg01no261_m22.b1 PHD_FILE: MSMg01no261_m22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:17 2005
         (615 letters)



>mm_chr5_33076957_33077972
          Length = 1016

 Score =  774 bits (400), Expect = 0.0
 Identities = 565/628 (89%), Gaps = 22/628 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatctggggtagggtccagtgtctggtgaggcagtcagtccccactcagtcagccttcaa 60
           |||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||
Sbjct: 198 aatctggggtagggtccagtgtctggtgaggcagtcggtccccattcaatcagccttcaa 257

                                                                       
Query: 61  ggctatgagtatctacactgcacagcaaagtttcacctcgaagaa-ca-aggggacacgg 118
           ||||||||||||||| ||||||  |||||||  ||||| ||| || || |||||||| ||
Sbjct: 258 ggctatgagtatctatactgcagggcaaagt--cacctggaa-aagcataggggacatgg 314

                                                                       
Query: 119 agtcctgggcagaggtagtcagggg--tactcctgaaaacagccagtcagcagttcctaa 176
            |||||||||| |||||| ||||||  ||||| ||||||||||||||| |||||||||||
Sbjct: 315 ggtcctgggcaaaggtagccaggggggtactcttgaaaacagccagtcggcagttcctaa 374

                                                                       
Query: 177 aagtttgtgctggctggggagaggtggagacaggaaggaggtagcttctggtggagcgtg 236
           ||||| |||| | |||||||| ||||||||||||||||||| || |||||||| || |||
Sbjct: 375 aagttagtgccgactggggaggggtggagacaggaaggaggcagtttctggtgaagagtg 434

                                                                       
Query: 237 gctggtaacagaagcgacatacacccaatctcagcacttaggcaatagaggcaggaggat 296
           |||| | ||    | |||||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 435 gctgatgac----gtgacatatacccaatctcagcacttaggcagtagaggcaggaggat 490

                                                                       
Query: 297 agagagctcaaaatgagcctgggcttcatagcaagactctgtctcagtaaattagtattt 356
            ||||| |||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ggagagttcaaaatgagtctaggcttcatagcaagactctgtctcagtaaattagtattt 550

                                                                       
Query: 357 aagta------tttttaaaaaa-tagtggcacacagaagagaaaccttgggggtgcagga 409
           |||||      ||||||||||| ||||||||  |||||||||| ||||||||||||||||
Sbjct: 551 aagtaagtatttttttaaaaaaatagtggcatgcagaagagaagccttgggggtgcagga 610

                                                                       
Query: 410 gtggtaggacaggagtgctgccctgtaacagtcttccctgaggctcaacaggcagggcag 469
           ||||| ||| ||||||||  ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 611 gtggtgggataggagtgccaccctggaacagtcttccctgaggctcaacaggcagggcag 670

                                                                       
Query: 470 tcaccctcagcactgcaaggc--atggtgggcaatgaatcaggacaggactcactttcca 527
           |||||||||||||||||||||  |  |||||||||||||||||||||||||||||| |||
Sbjct: 671 tcaccctcagcactgcaaggccca--gtgggcaatgaatcaggacaggactcacttccca 728

                                                                       
Query: 528 gggtccctactagctttcttgttcagcatccaccctttgctcctctacaggtatcagcga 587
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 729 gggtccctactagctttcttgttcagcatccaccctttgctcctctacaggtgtcagtga 788

                                       
Query: 588 agcccagcatccctgggcctcagccttg 615
           ||||||||||||||||||||||||||||
Sbjct: 789 agcccagcatccctgggcctcagccttg 816


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1016
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1006
Effective search space:   608630
Effective search space used:   608630
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)