Query= MSMg01no262_m06.b1 MSMg01no262_m06.b1 CHROMAT_FILE:
MSMg01no262_m06.b1 PHD_FILE: MSMg01no262_m06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:29 2005
(249 letters)
>mm_chr5_117066289_117066937
Length = 649
Score = 466 bits (241), Expect = e-136
Identities = 247/249 (99%)
Strand = Plus / Minus
Query: 1 gaacaagtctgagggtgtgaagcccgggtagggtatcagaatttaagacatgtccaagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gaacaagtctgagggtgtgaagcccgggtagggtatcagaatttaagacatgtccaagtt 390
Query: 61 gttctaaagtgtactcggtctctgtcaccaagatgggatgagtcacatgcgtgagcacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gttctaaagtgtactcggtctctgtcaccaagatgggatgagtcacatgcgtgagcacag 330
Query: 121 cgtcggagatcatttctgtaaataaggtgagctgtgcatgccacagaggcatgcttattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 cgtcggagatcatttctgtaaataaggtgagctgtgcatgccacagaggcatgcttattt 270
Query: 181 ccctagacggtagggctgtggagagctctgagtgacaaatgacaccattaggggatgaca 240
|||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 269 ccctagacgggagggctgtggagagctctgagcgacaaatgacaccattaggggatgaca 210
Query: 241 gtgtgtgga 249
|||||||||
Sbjct: 209 gtgtgtgga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no262_m06.g1 MSMg01no262_m06.g1 CHROMAT_FILE:
MSMg01no262_m06.g1 PHD_FILE: MSMg01no262_m06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:29 2005
(122 letters)
>mm_chr5_116896905_116897427
Length = 523
Score = 226 bits (117), Expect = 3e-64
Identities = 120/121 (99%), Gaps = 1/121 (0%)
Strand = Plus / Plus
Query: 1 ctgtccctacctttgctgggttaaggcttgggatactgggtacttctaggtaaggtctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgtccctacctttgctgggttaaggcttgggatactgggtacttctaggtaaggtctaa 260
Query: 61 gggatgtggctcaggagcgggagtaggaatgcgcggggcgggtggggg-tgagagttggg 119
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 gggatgtggctcaggagcgggagtaggaatgcgcggggcgggtggggggtgagagttggg 320
Query: 120 g 120
|
Sbjct: 321 g 321
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 122
Length of database: 523
Length adjustment: 8
Effective length of query: 114
Effective length of database: 515
Effective search space: 58710
Effective search space used: 58710
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
