Query= MSMg01no264_g13.b1 MSMg01no264_g13.b1 CHROMAT_FILE:
MSMg01no264_g13.b1 PHD_FILE: MSMg01no264_g13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:34 2005
(295 letters)
>mm_chr5_97884929_97885623
Length = 695
Score = 571 bits (295), Expect = e-167
Identities = 295/295 (100%)
Strand = Plus / Plus
Query: 1 ctgtattacatagtaaaaaacagcctgttccgtatgtgtttttggcttgaccttcatgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgtattacatagtaaaaaacagcctgttccgtatgtgtttttggcttgaccttcatgga 260
Query: 61 aacacatttgtcccactaaagcagcagactgatcccccaaacatccagatattggcacgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacacatttgtcccactaaagcagcagactgatcccccaaacatccagatattggcacgc 320
Query: 121 cttccaaggcccctgatgtcatcaggccatagatctcagaagaactgcatacatttggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttccaaggcccctgatgtcatcaggccatagatctcagaagaactgcatacatttggga 380
Query: 181 ggatgctcattggaatttcaaaaaagtcacagagatctttatcccattccaaagagtgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggatgctcattggaatttcaaaaaagtcacagagatctttatcccattccaaagagtgga 440
Query: 241 tgttaaaaagcatcgttctgcatgcatttgttacatcggtgcaatggatgcctcc 295
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgttaaaaagcatcgttctgcatgcatttgttacatcggtgcaatggatgcctcc 495
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 695
Length adjustment: 9
Effective length of query: 286
Effective length of database: 686
Effective search space: 196196
Effective search space used: 196196
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no264_g13.g1 MSMg01no264_g13.g1 CHROMAT_FILE:
MSMg01no264_g13.g1 PHD_FILE: MSMg01no264_g13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:35 2005
(294 letters)
>mm_chr5_97927947_97928639
Length = 693
Score = 522 bits (270), Expect = e-153
Identities = 288/294 (97%), Gaps = 1/294 (0%)
Strand = Plus / Minus
Query: 1 gtaaggcaactactgcaatgaaaaaaggcaggattgagggagaaactaaccatggtctcg 60
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct: 493 gtaaggcaactactgcaatgaaaaaaggcaggattgaggaagaaactaaccatggtctag 434
Query: 61 atgtctaaatgctgtggggtttttttcctgtggtgagaacacaaatgaatgaaataagtt 120
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 433 atgtctaaatgctgtgggg-ttttttcctatggtgagaacacaaatgaatgaaataagtt 375
Query: 121 agctgtgagtaatgccctcttgtaagactgtaagaccatgaaaaggccttggattcttct 180
|||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct: 374 agctgtgagtaatgccctctcgtaagactgtaagaccatgaaaaggccttgggttcttct 315
Query: 181 cttatccactctaagaacagttgctattgcctagttatcttcagcattttgcaaggacta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 cttatccactctaagaacagttgctattgcctagttatcttcagcattttgcaaggacta 255
Query: 241 tgtatatacgaattattatgtgaatatcatactggagaatcatgatccagaata 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tgtatatacgaattattatgtgaatatcatactggagaatcatgatccagaata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 693
Length adjustment: 9
Effective length of query: 285
Effective length of database: 684
Effective search space: 194940
Effective search space used: 194940
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
