Query= MSMg01no273_b21.b1 MSMg01no273_b21.b1 CHROMAT_FILE:
MSMg01no273_b21.b1 PHD_FILE: MSMg01no273_b21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:26 2005
(322 letters)
>mm_chr5_47379761_47380482
Length = 722
Score = 580 bits (300), Expect = e-170
Identities = 312/316 (98%)
Strand = Plus / Plus
Query: 5 gaattcccggtctttctccctcaaccttctgagcacttgcattagaggtgtgcatcatgc 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcccggtctttctgcctcaaccttctgagcacttgcattagaggtgtgcatcatgc 264
Query: 65 ctggctgatttgatgccttttttcactctgaacacataacacaatggctggcacatagta 124
|||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctggctgatttgatgcgtttttgcactctgaacacataacacaatggctggcacatagta 324
Query: 125 ggtggtcacaacaatttatggatggtactcaggagggaagaaatatagctgatgagaaca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggtggtcacaacaatttatggatggtactcaggagggaagaaatatagctgatgagaaca 384
Query: 185 tcaggagaaaggtatgatgtctgtcttctaggaaaatccctggagctaagatgtactatt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcaggagaaaggtatgatgtctgtcttctaggaaaatccctggagctaagatgtactatt 444
Query: 245 gctttctattatggttcatcttgtgaaatgactccgatcttatctaatctttatttctcc 304
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 445 gctttctattatggttcatcttgtgaaatgactccgagcttatctaatctttatttctcc 504
Query: 305 ctgaataaatcatttc 320
||||||||||||||||
Sbjct: 505 ctgaataaatcatttc 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space: 223169
Effective search space used: 223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no273_b21.g1 MSMg01no273_b21.g1 CHROMAT_FILE:
MSMg01no273_b21.g1 PHD_FILE: MSMg01no273_b21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:26 2005
(292 letters)
>mm_chr5_47485195_47485886
Length = 692
Score = 518 bits (268), Expect = e-151
Identities = 286/296 (96%), Gaps = 8/296 (2%)
Strand = Plus / Minus
Query: 1 ttttgagaaccattgttctctatgttctctggcctatttggatacaggagacagtagagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ttttgagaaccattgttctctatgttctctggcctatttggatacaggagacagtagagc 433
Query: 61 ttaagaaagaggcagaaagaaatttttagagttatgaatagaaaaaagaaagatggtttt 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 432 ttaagaaagaggcagaaagaaatttttagagttatgaatagaaacaagaaagatggtttt 373
Query: 121 atagaatcaaaaacaatacatacctcaagaaggcaaacgttgccagtcaaataagaaagg 180
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 372 atagaatcaaaaacaatacatacctcaagaaagcaaacgttgccagtcaaataagaaagg 313
Query: 181 aaagttgagaacaactgatctagagaacaagattattagagagattatgcactagtaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 aaagttgagaacaactgatctagagaacaagattattagagagattatgcactagtaatt 253
Query: 241 tattttctaaatg----attttaaacatacttaactctctgcttgatagtaactta 292
||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 252 tattttctaaatgaagca----aaacatacttaactctctgcttgatagtaactta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
