Query= MSMg01no273_m14.b1 MSMg01no273_m14.b1 CHROMAT_FILE:
MSMg01no273_m14.b1 PHD_FILE: MSMg01no273_m14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:13 2005
(314 letters)
>mm_chr5_46279857_46280570
Length = 714
Score = 576 bits (298), Expect = e-169
Identities = 307/310 (99%)
Strand = Plus / Plus
Query: 5 gaattcaaacaagattttccaacctgtagagcaatgtgggttttatttggctcaactcac 64
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 205 gaattcaaacaagattttccaacctgtagagcaatgtgggttttctttggctcaactcac 264
Query: 65 tttgcatggcaacatttcctggaatttgatccatgaaagactattctttatttaaagata 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tttgcatggcaacatttcctggaatttgatccatgaaagactattctttatttaaagata 324
Query: 125 atccttgaaaaatagtgttcaccattcaaacacatttaggtaactctaggggaagcagaa 184
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 325 atccttgaaaaataatgttcaccattcaaacacatttaggtaactctaggagaagcagaa 384
Query: 185 ctgaaaataaaattgtaagctgtcattcttttcagtgtttagtattgaacatgcatctga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctgaaaataaaattgtaagctgtcattcttttcagtgtttagtattgaacatgcatctga 444
Query: 245 tttttctaaccaacaagcaaacatttgtcaagcagctttcattggccagacaccacagta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttttctaaccaacaagcaaacatttgtcaagcagctttcattggccagacaccacagta 504
Query: 305 tgctttggcg 314
||||||||||
Sbjct: 505 tgctttggcg 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no273_m14.g1 MSMg01no273_m14.g1 CHROMAT_FILE:
MSMg01no273_m14.g1 PHD_FILE: MSMg01no273_m14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:13 2005
(288 letters)
>mm_chr5_46417137_46417823
Length = 687
Score = 474 bits (245), Expect = e-138
Identities = 275/285 (96%), Gaps = 1/285 (0%)
Strand = Plus / Minus
Query: 1 caggatccaacccaaacctcaggcttggtgagaagcacctcgtcccataagcagacccag 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 caggatccaacccaagcctcaggcttggtgagaagcacctcgtcccataagcagacccag 425
Query: 61 caccccaaatttccttctgtttaaagactgactaatgttcataggtatgcactcttacgt 120
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 424 caccccaaatttccttctgtttaaagactgaataatgttcataggtatgcactcttacat 365
Query: 121 catctgcagatgcatacttgacctgctcctacttggctcttagcaacaacgcttcagtca 180
||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 364 catgtgcagatgcatacttgacctgctcctacttggctcttaacaacgacgcttcagtca 305
Query: 181 atgtaggaatactgctattgtcagttcactgacttagtcttctgaataaatatcaagagt 240
||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 304 atgtaggaatactgctattgtcagttcactgacttagtcttttgaa-aaatatcaagagt 246
Query: 241 aggaatgatttgtcttatgataatcctgcttacattgtttccata 285
||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 245 gggaatgatttgtcttatgataatcctgcttacactgtttccata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 687
Length adjustment: 9
Effective length of query: 279
Effective length of database: 678
Effective search space: 189162
Effective search space used: 189162
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
