Query= MSMg01no274_h09.b1 MSMg01no274_h09.b1 CHROMAT_FILE:
MSMg01no274_h09.b1 PHD_FILE: MSMg01no274_h09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:00 2005
(525 letters)
>mm_chr5_32063776_32064698
Length = 923
Score = 853 bits (441), Expect = 0.0
Identities = 488/505 (96%), Gaps = 4/505 (0%)
Strand = Plus / Minus
Query: 22 gataaactgagtagtagtatatggtatactcaacactgacaaggtcttctcttgtcccct 81
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 595 gataaactgagtagtagtatatggtatactcaacactgacaaggtcttctcttgtctcct 536
Query: 82 gtcagttcctcctctactgaacgctgaggagagactttcctgttgtggtgcctggccctg 141
||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 535 gtcagtttctcctctactgaacactgaggagagactttcctgttgtagtgcctggccctg 476
Query: 142 cgctcttttgacagggctcaagtactctatgagcagtatccgtcctgtctgcctgaagcg 201
||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 475 cgctcttttgacagggctcaagtgctctatgagcagtatctgtcctgtctgcctgaagcg 416
Query: 202 tgagttccaggttcacagtgtggtgaagcagaagaaaaacaaagccagagagacacacat 261
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 415 tgagttccaggttcacagtgtggtgaagcaggagaaaaacaaagccagagagacacacat 356
Query: 262 gccatcactaaagaagtcaaacagccacagtgaatttgatggctgg-ggggaaaaaaaat 320
||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 355 gccatcactaaagaagtcaaacagccatagtgaatttgatggctggaggggaaaaaaac- 297
Query: 321 atcattcaaagccctggtgggagggcttcctatcccagagcctaatatttcgtgtatgta 380
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 296 --cattcaaagccctggtgggagggcttcctgccccagagcctaatatttcgtgtatgta 239
Query: 381 tgcttgtggtgtgttgcatatgcatatctgtatcacacatgtacataatatataacatgt 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 tgcttgtggtgtgttgcatatgcatatctgtatcacacatgtacataatatataacatgt 179
Query: 441 tatatataatgtgttataaataatatatatttgatacatagatatatagatatggcagat 500
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 178 tatatataatgtgttataaataatatatatgtgatatatagatatatagatatggcagat 119
Query: 501 catttaataatgttgccttgaaaaa 525
|||||||||||||||||||||||||
Sbjct: 118 catttaataatgttgccttgaaaaa 94
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 923
Length adjustment: 10
Effective length of query: 515
Effective length of database: 913
Effective search space: 470195
Effective search space used: 470195
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no274_h09.g1 MSMg01no274_h09.g1 CHROMAT_FILE:
MSMg01no274_h09.g1 PHD_FILE: MSMg01no274_h09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:00 2005
(233 letters)
>mm_chr5_31953942_31954574
Length = 633
Score = 427 bits (221), Expect = e-124
Identities = 230/233 (98%)
Strand = Plus / Plus
Query: 1 tgcaagtccctcatagaagaagcaagtgagttgtatgtacctcgctctcgttgcagcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgcaagtccctcatagaagaagcaagtgagttgtatgtacctcgctctcgttgcagcaga 260
Query: 61 aaatactggagagggtatagaactgggggtccaggtcagccatggctggagctgggttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaatactggagagggtatagaactgggggtccaggtcagccatggctggagctgggttga 320
Query: 121 acaaggttttcactgcaaaggaatggaaaaggagctcaatagtcatcatttaaaaatatt 180
|||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 321 acaaggttttcactgcaaaggaatggaaaaggagctcaatggtcatcattttaaaatatt 380
Query: 181 gatttagttcttttacttatcttttaggctagatgtaaagtaatggggttggt 233
|||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 381 gatttagttcttttacttctcttttaggctagatgtaaagtaatggggttggt 433
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 233
Length of database: 633
Length adjustment: 9
Effective length of query: 224
Effective length of database: 624
Effective search space: 139776
Effective search space used: 139776
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
