Query= MSMg01no275_h03.b1 MSMg01no275_h03.b1 CHROMAT_FILE:
MSMg01no275_h03.b1 PHD_FILE: MSMg01no275_h03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:11 2005
(562 letters)
>mm_chr5_92002514_92003475
Length = 962
Score = 864 bits (447), Expect = 0.0
Identities = 459/463 (99%)
Strand = Plus / Minus
Query: 1 acatcttgatcttttattatttccatttagcattttttctgacaggctccctcatcccta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 acatcttgatcttttattatttccatttagcattttttctgacaggctccctcatcccta 404
Query: 61 ttgttattgatataacaccttcatatgcttgtggtctcttgtttgctatgaatttttatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ttgttattgatataacaccttcatatgcttgtggtctcttgtttgctatgaatttttatt 344
Query: 121 ctccagtgttgtttcttctcatcttctttcttagtgttcccattatcacttctttgatag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ctccagtgttgtttcttctcatcttctttcttagtgttcccattatcacttctttgatag 284
Query: 181 catggtccttgtcctgtatgccattgtttctagcttcattgaccacccattaccaggtga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 catggtccttgtcctgtatgccattgtttctagcttcattgaccacccattaccaggtga 224
Query: 241 cattaaaaaacacacaattgaccttttctgatgaaaagtgactgaaactttggtaatctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 cattaaaaaacacacaattgaccttttctgatgaaaagtgactgaaactttggtaatctc 164
Query: 301 caaagtaatatgaccatctttctaatggtagtaagatgattgctagctggaaactcaaaa 360
||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||
Sbjct: 163 caaagtaatatgaccatctttctaatggtagtaagattattgctagttggaagctcaaaa 104
Query: 361 tagcaggagggtgggcatagtccaccagaaagttattatagaggtgggacttctgtttgc 420
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 103 tagcaggagggtgggcatagtccaccagaaagttattagagaggtgggacttctgtttgc 44
Query: 421 attctctgacctttaacctgaggcagctgagctgattaccaat 463
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 attctctgacctttaacctgaggcagctgagctgattaccaat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 562
Length of database: 962
Length adjustment: 10
Effective length of query: 552
Effective length of database: 952
Effective search space: 525504
Effective search space used: 525504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no275_h03.g1 MSMg01no275_h03.g1 CHROMAT_FILE:
MSMg01no275_h03.g1 PHD_FILE: MSMg01no275_h03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:11 2005
(284 letters)
>mm_chr5_91865394_91866078
Length = 685
Score = 489 bits (253), Expect = e-143
Identities = 277/287 (96%), Gaps = 5/287 (1%)
Strand = Plus / Plus
Query: 1 acctatttggagaaaccttcagggtttgagatagaagtttcttggag---ccaaaaagga 57
||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 201 acctatttggagaaaccttcagggtttgagatagaagtttcctggagaaa--aaaaagga 258
Query: 58 acttctgaatgagccgttcccaacaacagctagcttcagagtaagaacagcacctcatac 117
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 acttctgaatgaaccgttcccaacaacagctagcttcagagtaagaacagcacctcatac 318
Query: 118 agcacatgaataaatgtaaaaatagaactagctaagcacgtgggatgacatcactcataa 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 agcacatgaataaatgtaaaaatagaactagctaagcacgtgggatgacatcactcataa 378
Query: 178 aagcctattctagggagagcacacactactttgaactaaactctttaaacagctatgctt 237
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 379 aagcctattctagcgagagcacacactactttgaactaaactctttaaacagctacgctt 438
Query: 238 catcctttgtgttaaggggtggaaagcttagtgagtacattgtctgt 284
|||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 439 catcctttgtgttaaggggtggaatgcttagtgagtacattgtctgt 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 685
Length adjustment: 9
Effective length of query: 275
Effective length of database: 676
Effective search space: 185900
Effective search space used: 185900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
