Query= MSMg01no276_o01.b1 MSMg01no276_o01.b1 CHROMAT_FILE:
MSMg01no276_o01.b1 PHD_FILE: MSMg01no276_o01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:54 2005
(287 letters)
>mm_chr5_117950711_117951397
Length = 687
Score = 474 bits (245), Expect = e-138
Identities = 277/289 (95%), Gaps = 4/289 (1%)
Strand = Plus / Minus
Query: 1 ctccgtgagctcaggagccatgtgtgtccatggctgctccatcagactttacac--acac 58
|||| |||||||||||| |||||||| |||||||||||||||||||| |||| ||||
Sbjct: 487 ctccatgagctcaggagtcatgtgtgcccatggctgctccatcagac--aacacaaacac 430
Query: 59 ttagcaaaaagtcaataaacaaccaccagtcaatgtgtggcttacagtgaccccttttaa 118
|||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 429 ttagcaaaaagtcaatgaacaaccaccggtcaatgtgtggcttacagtgaccccttttaa 370
Query: 119 gtggcagagctgaacagtcctgactctagcaccttgctcttaacagcccttctcagatat 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gtggcagagctgaacagtcctgactctagcaccttgctcttaacagcccttctcagatat 310
Query: 179 atcagagatcctgtgagctttgatccagcacatactgaagacctactgtgtgtcagagtc 238
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 309 atcagagatcctgtgagctttgatccagcacatactgaagacctactgtgtgccagagtc 250
Query: 239 tgtgctggatatatcccaaaccttgtcatctgggaagcagcagagagtg 287
|||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tgtgctgggtatatcccaaaccttgtcatctgggaagcagcagagagtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
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