CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCATTATTTACTGAGAAGCTGTAAATTGAGCCCTGGGAAAGTTGTCCA
GAGAGAGACATTTATACTCCCAATTCCATCACACTGTGTCAAATGCCCAG
CGAATTTCTGCTGGATATTTGTAAGCTCTTAATTTGATGTTACCTTTGTT
CACTCTCTCAATCAAGGAGATGTAGTCATTTCTGTTGGACATCATTAACT
CCTGATTTGATGGCATTTTGTATATCTGTTGCTCTTATCTATGTACTACT
TTCTATTTGAACTTTTACATTCGCTTGCTATATGCTTAATAAACTGAATG
TATGATTCTTATAGATCATTCTTCAAACATACAGAACAATGCTTTTTCAG
TAACAAATATTTGCATAGTTTCTATATGCTAAAATTTACCCTTACTGCTT
AATTTTATGTGGTCAATGAGATTTAATGAGATATTGTCATAAAAATATCT
CAATAATCCTTTTTTTTTAGATTGAGTAATAAAATACTATCTTCTAATGG
TGGAAGTACATTGTTTTTAAAGAATTGTAGTAAAAGATGAAGCATAAATT
TGACCTTAGACTCAGACTGATGTTCTAACTAATTTTTCTATGTTCTTTTA
TATCCCTTAACATTTCATCTCATTTCATATCTATCAAGAAAATTATCCCC
AGATATTTATATCTCTC

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTGCATTAAAACCCTGTGGACCTGTTTTT
TTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTAGGGGGGGG
GAGGGAATGACTTGATGAGTTCTTATTTTTTCTTAGGGAATATAGGGTTA
TTTAGTTACTTTATTAGATCTAAATTCAACTATGGTAATTGATATCTGAC
TAGAATATCACCCATTTCATTTTGATTTTTTTCAATATTTTGGAGTTTAG
GCTTTTGAAGTCAGATCTTTTTATTTTTTGAACTTTCTCAGGTTCATTGG
TATTTTGGTCCTTTTCCCCCCCCCCCCCTGAAATTTGCATATTGTCTCTC
TGACTTTTAGTTCATTTGGAAAAAAAAATGTCTATCTTGGTGAGTTTCTC
AAGGAGCCAGCTCTTGGATTCCTTGAGTCTTTTAATTACCCTCTTTGTTT
CTTATTGATTGATTTAATTTCTGGTTTATTTCATGCCATCCAATCCTACC
AAACTCTCAATGGGATGAGGGTTTGCCTCACCTTGGGAACTACAGCATGT
AATAAACAAAGCTCTTGCTTTTCTCTGTGGTGGGTGATGCATACCACATC
CTCATTAAAAACCCTGGATAACCAGGCTTAAGGGCGTATTAAATTAGCCC
ACCTTTGGCAGTGT

Query= MSMg01no278_f21.b1 MSMg01no278_f21.b1 CHROMAT_FILE:
MSMg01no278_f21.b1 PHD_FILE: MSMg01no278_f21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:40 2005
         (649 letters)



>mm_chr5_13669190_13670237
          Length = 1048

 Score = 1170 bits (605), Expect = 0.0
 Identities = 638/649 (98%), Gaps = 1/649 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   agctgtaaattgagccctgggaaagttgtccagagagagacatttatactcccaattcca 60
           |||||||||||||||||||||||| |||||||||||||||||||||  || | |||||||
Sbjct: 201 agctgtaaattgagccctgggaaaattgtccagagagagacatttagcctacaaattcca 260

                                                                       
Query: 61  tcacactgtgtcaaatgcccagcgaatttctgctggatatttgtaagctcttaatttgat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcacactgtgtcaaatgcccagcgaatttctgctggatatttgtaagctcttaatttgat 320

                                                                       
Query: 121 gttacctttgttcactctctcaatcaaggagatgtagtcatttctgttggacatcattaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttacctttgttcactctctcaatcaaggagatgtagtcatttctgttggacatcattaa 380

                                                                       
Query: 181 ctcctgatttgatggcattttgtatatctgttgctcttatctatgtactactttctattt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctcctgatttgatggcattttgtatatctgttgctcttatctatgtactactttctattt 440

                                                                       
Query: 241 gaacttttacattcgcttgctatatgcttaataaactgaatgtatgattcttatagatca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaacttttacattcgcttgctatatgcttaataaactgaatgtatgattcttatagatca 500

                                                                       
Query: 301 ttcttcaaacatacagaacaatgctttttcagtaacaaatatttgcatagtttctatatg 360
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttctccaaacatacagaacaatgctttttcagtaacaaatatttgcatagtttctatatg 560

                                                                       
Query: 361 ctaaaatttacccttactgcttaattttatgtggtcaatgagatttaatgagatattgtc 420
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 561 ctaaaatttacccttactgcttaattttatgtggtcaaagagatttaatgagatattgtc 620

                                                                       
Query: 421 ataaaaatatctcaataatcctttttttttagattgagtaataaaatactatcttctaat 480
           |||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||
Sbjct: 621 ataaaaatatctcaataatcctttctttt-agattgagtaataaaatactatcttttaat 679

                                                                       
Query: 481 ggtggaagtacattgtttttaaagaattgtagtaaaagatgaagcataaatttgacctta 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ggtggaagtacattgtttttaaagaattgtagtaaaagatgaagcataaatttgacctta 739

                                                                       
Query: 541 gactcagactgatgttctaactaatttttctatgttcttttatatcccttaacatttcat 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gactcagactgatgttctaactaatttttctatgttcttttatatcccttaacatttcat 799

                                                            
Query: 601 ctcatttcatatctatcaagaaaattatccccagatatttatatctctc 649
           |||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 800 ctcatttcatatctatcaagaaaattatccccaggtatttatatctctc 848


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1048
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1038
Effective search space:   663282
Effective search space used:   663282
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)