Query= MSMg01no278_f22.b1 MSMg01no278_f22.b1 CHROMAT_FILE:
MSMg01no278_f22.b1 PHD_FILE: MSMg01no278_f22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:41 2005
(312 letters)
>mm_chr5_92756345_92757056
Length = 712
Score = 569 bits (294), Expect = e-166
Identities = 303/306 (99%)
Strand = Plus / Plus
Query: 5 gaattctcagttggttaaccacagacattcttatcagtgcacagcatcggttgaggaaag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcagttggttaaccacagacattcttatcagtgcacagcatcggttgaggaaag 264
Query: 65 tgatgcaggagacaacttagaaaaggatctcttatgtcactctctgttgccagggctgcg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgatgcaggagacaacttagaaaaggatctcttatgtcactctctgttgccagggctgcg 324
Query: 125 gatgaaatatttcacaggataaattcgaagtaaagcacccagaatcccctttacatctga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gatgaaatatttcacaggataaattcgaagtaaagcacccagaatcccctttacatctga 384
Query: 185 gaaatgttttttcattattaaaacatttaaatatgctttgaaccctcattgggaactcac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaaatgttttttcattattaaaacatttaaatatgctttgaaccctcattgggaactcac 444
Query: 245 aatacctacgccaagaaggcatatttgacttgttaggtatagattacgacctttggataa 304
|||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 445 aatacctacgccaagaaggcatatttaacttggcaggtatagattacgacctttggataa 504
Query: 305 ctgctc 310
||||||
Sbjct: 505 ctgctc 510
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 712
Length adjustment: 9
Effective length of query: 303
Effective length of database: 703
Effective search space: 213009
Effective search space used: 213009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no278_f22.g1 MSMg01no278_f22.g1 CHROMAT_FILE:
MSMg01no278_f22.g1 PHD_FILE: MSMg01no278_f22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:41 2005
(281 letters)
>mm_chr5_92913492_92914170
Length = 679
Score = 426 bits (220), Expect = e-123
Identities = 262/278 (94%), Gaps = 6/278 (2%)
Strand = Plus / Minus
Query: 5 tgtatt-aagggtgacttgaacttcttgactctcctccttctccacttggattacagcct 63
|||||| |||||||||||||||||||||||| |||||||| ||||||||| ||||||
Sbjct: 317 tgtattgaagggtgacttgaacttcttgact---ctccttctaaacttggattgcagcct 261
Query: 64 tgatttaatgttaggtgtgaacccagggctccttacatgcatattactaactgaactgag 123
|||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 260 tgatttaatgttaggtgtgaacccagggctccttacgtgcttattactaactgaactgag 201
Query: 124 acagagttttaccatcttgaaatttactctgtagcctaaattggccttgaacttgaactt 183
|||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 200 acagggttttaccggcttgaaatttattctgtagcctaaattggccttgaacttgaactt 141
Query: 184 gtggctatcctcctgcctcagccttccaagtgctaggatttcaaacatagtctaccacac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 140 gtggctatcctcctgcctcagccttccaagtgctaggatttcaaacatagtctac--cac 83
Query: 244 actcagtttgcccatttctaagccccactcactgtgta 281
|||||||||| |||||||||||||||||||||||||||
Sbjct: 82 actcagtttgtccatttctaagccccactcactgtgta 45
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 679
Length adjustment: 9
Effective length of query: 272
Effective length of database: 670
Effective search space: 182240
Effective search space used: 182240
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
