Query= MSMg01no279_e12.b1 MSMg01no279_e12.b1 CHROMAT_FILE:
MSMg01no279_e12.b1 PHD_FILE: MSMg01no279_e12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:50 2005
(344 letters)
>mm_chr5_75079463_75080206
Length = 744
Score = 629 bits (325), Expect = 0.0
Identities = 340/345 (98%), Gaps = 2/345 (0%)
Strand = Plus / Plus
Query: 1 ccacaatgcctcagacctgggcaaaattatcagcaaaggtcactaacacgcaccctcacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 ccacaatgcctcagacctgggcaaaattatcagcaaaggtcactaacacgcacccgcacc 260
Query: 61 accatctcttttgatcacaccctccttggggaaagcatttactacaaacctacgctggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accatctcttttgatcacaccctccttggggaaagcatttactacaaacctacgctggaa 320
Query: 121 acatctggctggacgtcttgagtccgccgtcataaccagcatgggaaacacatgctaagc 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 acatctggctggacgtcttgagtccgccgtcataaccagcatgggaaacgcatgctaagc 380
Query: 181 aatacacacaggcccttgtatgagaaaagctttcttgttagagaatgcactcat-ttctc 239
||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 381 aatacacgcaggcccttgtatgagaaaagctttcttgttagagaatgcactcatgtt-tc 439
Query: 240 agaagacaaagccacagattcatgacctaaggtatgtgacctttaaaaaagttacctgca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 agaagacaaagccacagattcatgacctaaggtatgtgacctttaaaaaagttacctgca 499
Query: 300 cctgcctcttgccctggccatgacaggaaccaagataaacacaag 344
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cctgcctcttgccctggccatgacaggaaccaagataaacacaag 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no279_e12.g1 MSMg01no279_e12.g1 CHROMAT_FILE:
MSMg01no279_e12.g1 PHD_FILE: MSMg01no279_e12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:50 2005
(282 letters)
>mm_chr5_75210970_75211651
Length = 682
Score = 522 bits (270), Expect = e-153
Identities = 279/282 (98%)
Strand = Plus / Minus
Query: 1 ctcctgatacttcctccacctatggcgttttgttaaacacaacctggatggtgagacaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 ctcctgatacttcctccacctatggcgttttgttaaacacaacctggatggtgagacaga 579
Query: 61 gggtagagagctgtcttttgcctcattctgtagtccctgcacctaagacaagccagacac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 gggtagagagctgtcttttgcctcattctgtagtccctgcacctaagacaagccagacac 519
Query: 121 actcttgtgctcaatgaatatttgttgaatcaaagacaaattttgtaagtgaatgatggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 actcttgtgctcaatgaatatttgttgaatcaaagacaaattttgtaagtgaatgatggc 459
Query: 181 agatgattagatagtacctggtgcattcatcgtgtcctttctggtgagtccacctagagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 agatgattagatagtacctggtgcattcatcgtgtcctttctggtgagtccacctagagg 399
Query: 241 ccagcagtgtgactcacacctgtaattcccagaaactgagga 282
||||| |||||||||||||||||||| |||||| ||||||||
Sbjct: 398 ccagcggtgtgactcacacctgtaatccccagagactgagga 357
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
