TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCCTAATTTCCTTTGACTGATTTGAGAGCAGCCCAAGTAATTTAGT
AAGACATTGTCAAAAAATAAATCACAAAACTGGAGCTAGGGACACAGCTT
CGTAATGGAGAGCTTTCCTGGCATGCACAAGGCCCTGGCTTCAACCCTCT
GCATTGGAAAAAGTTAAAGAGATGGGCTACAGCAGTGTTACCCAGTGGCA
CATGCCATGGAAACTGTTAGGGGCACACTCTGGAAGCTCAAAGGGAAAAC
TCAGGACTCCCTCAAGAATCTCACTAGATAGGGAGGCAGCAGAGAAGGGA
GGAGCTACCGCATACACCCCCCAGAGAGCTCACAGTGGTGCAGTAAAAAC
AGAACTCATGAAGACCCCACTCTTCCTGGCCCTTCTTCGCAGAATGCATG
CAGTAAGAACTAACTGCAGGTCAAGTCTGTCTCAAGCTTCATTTCCAATC
AGCTATGCACAGAGGAGCCCACAGCGCCTGCTGCCTCTGAGAAGGTTGGC
TCTTTCCTTCTGGGTTCACTGACATGGGAGTGGATGTGCACTGAGTACAC
TCTACCTGCACTAAGGCAAACATGGCCTCTGGATCTCCTGCTCCTTCAAT
GCTCTGTGGTGAGAAAGGCAAAATCTAGGCAGTGACACAGCAAGCCCAAG
TCAAGCACGTGTCTCATGCCCTCTGTACTTTCTCAAAATGTGTGAAACAA
GTCAGGGA

ACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTGGCAGGAACCTGGAGGCAGGAACTGA
AGCAGAAGCCACCGAGGAGCACCGCTTACTGCCTGGCTTCCCTTGAACTG
ATTTTTCAGCTAACTTTTTTATATTGCCCAGGACCACCTGTCTCAGGGCT
GCAGTAGGCTAGACCCTTCCACATCAATGGCTAAGCAAATGTCCCCAGAC
TTTCCTACAGGCCAGCCTGATAGTGTCAAGTTGACAAAGACCTAAATAAT
GCAATCTAAAAACCTGCGCCTGAGGGTCACACGGTGTCAGGTTGGACACA
GAGAACAGCTATGAAGAGGACGCTTCGCCGTAAGATAACTTGGACTCTGA
ATCTATAACATTCCCACTCTGAACCACTGGGAAGTTCTAATCAGCCAATC
TCCTTGCAGAATCTTTGTCACGAGTATGGATTTTTTTCCCTTGCAACTTT
GCTTCCTGCTCTGACTTTTCAGAGGGCATAATACAAGCACTTAGCAACCC
ACTGTAAGGTCTTAGCTAAGCACACTCGAGATCCAGATGGGATCGGCAGG
GGTTTGTTGGGAGCCGCCCTCACATTCGCCGTTACAAGATGGTGCTGACA
GCTGTGTTCTAAGTGGTAAACAAATAATCTGCGCATGTGCCAAGGGTATT
TCTCCACCCCATGTACTCTGCCTTCCCCGTGTCAATAACTCGGCCATGGT
T

Query= MSMg01no280_m15.b1 MSMg01no280_m15.b1 CHROMAT_FILE:
MSMg01no280_m15.b1 PHD_FILE: MSMg01no280_m15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:43 2005
         (659 letters)



>mm_chr5_149322529_149323588
          Length = 1060

 Score = 1185 bits (613), Expect = 0.0
 Identities = 646/657 (98%), Gaps = 2/657 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctcctaatttcctttgactgatttgagagcagcccaagtaatttagtaagacat 63
           ||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaattctcctaatttgatttgcctgatttgagagcagcccaagtaatttagtaagacat 264

                                                                       
Query: 64  tgtcaaaaaataaatcacaaaactggagctagggacacagcttcgtaatggagagctttc 123
           ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgtcaaaaaataaataa-aaaactggagctagggacacagcttcgtaatggagagctttc 323

                                                                       
Query: 124 ctggcatgcacaaggccctggcttcaaccctctgcattggaaaaagttaaagagatgggc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctggcatgcacaaggccctggcttcaaccctctgcattggaaaaagttaaagagatgggc 383

                                                                       
Query: 184 tacagcagtgttacccagtggcacatgccatggaaactgttaggggcacactctggaagc 243
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tacagcagtgttacccaggggcacatgccatggaaactgttaggggcacactctggaagc 443

                                                                       
Query: 244 tcaaagggaaaactcaggactccctcaagaatctcactagatagggaggcagcagagaag 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tcaaagggaaaactcaggactccctcaagaatctcactagatagggaggcagcagagaag 503

                                                                       
Query: 304 ggaggagctaccgcatacac-cccccagagagctcacagtggtgcagtaaaaacagaact 362
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ggaggagctaccgcatacactcccccagagagctcacagtggtgcagtaaaaacagaact 563

                                                                       
Query: 363 catgaagaccccactcttcctggcccttcttcgcagaatgcatgcagtaagaactaactg 422
           |||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 catgaagactttactcttcctggcccttcttcgcagaatgcatgcagtaagaactaactg 623

                                                                       
Query: 423 caggtcaagtctgtctcaagcttcatttccaatcagctatgcacagaggagcccacagcg 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 caggtcaagtctgtctcaagcttcatttccaatcagctatgcacagaggagcccacagcg 683

                                                                       
Query: 483 cctgctgcctctgagaaggttggctctttccttctgggttcactgacatgggagtggatg 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 cctgctgcctctgagaaggttggctctttccttctgggttcactgacatgggagtggatg 743

                                                                       
Query: 543 tgcactgagtacactctacctgcactaaggcaaacatggcctctggatctcctgctcctt 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tgcactgagtacactctacctgcactaaggcaaacatggcctctggatctcctgctcctt 803

                                                                    
Query: 603 caatgctctgtggtgagaaaggcaaaatctaggcagtgacacagcaagcccaagtca 659
           | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 cgatgctctgtggtgagaaaggcaaaatctaggcagtgacacagcaagcccaagtca 860


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1060
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1050
Effective search space:   681450
Effective search space used:   681450
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)