Query= MSMg01no289_c21.b1 MSMg01no289_c21.b1 CHROMAT_FILE:
MSMg01no289_c21.b1 PHD_FILE: MSMg01no289_c21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:23:26 2005
(671 letters)
>mm_chr5_84714242_84715312
Length = 1071
Score = 998 bits (516), Expect = 0.0
Identities = 552/566 (97%), Gaps = 5/566 (0%)
Strand = Plus / Minus
Query: 1 ccaaaatggttgagaagcacctaaagaaatgttcaacatccttagtcatca--tttgaac 58
||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 563 ccaaaatggttgagaagcacctaaagaaatgttcaacatccttagtcatcagg---gaag 507
Query: 59 cgcaaatcaaaacaacccttagattccacctcacaccagtcagaattgctagtgtagctt 118
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 506 tgcaaatcaaaacaacccttagattccaccttacaccagtcagaattgctagtgtagctt 447
Query: 119 tcaataacagtttagatagagtatatattatatgtgatattaaaaataaaaacataattc 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tcaataacagtttagatagagtatatattatatgtgatattaaaaataaaaacataattc 387
Query: 179 cattaacaaataattcatctagtcttaatcattttcttttagatcttggggagttcagaa 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 cattaacaaataattcatctagtcttaatcattttcttttagatcttggggagttcagaa 327
Query: 239 aaaggtagatatatgcatttttaatcattttatttgtttatatttcaaatgatatctctt 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 aaaggtagatatatgcatttttaatcattttatttgtttatatttcaaatgatatctctt 267
Query: 299 tcttatttacccctccaatacagccccaatatatcgcccttttcccactcctccccgcct 358
||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 266 tctcatttacccctccaatacagccccaatatatcgcccttttcccactcctctttgcct 207
Query: 359 ctatgagggtgctcctccacccactcacccaatctcatctcaccactctagcatggccca 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ctatgagggtgctcctccacccactcacccaatctcatctcaccactctagcatggccca 147
Query: 419 agctgaggcattcagccttcacaggaacaagggcattccctcacattaatgttagaaaag 478
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 agctgaggcattaagccttcacaggaacaagggcattccctcacattaatgttagaaaag 87
Query: 479 tccatcctctaatacatatgtatctgaggccagggctccttccatatatactctctgttt 538
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 86 tccatcctctaatacatatgtatgtgaggccagggctccttccatatatactctctgttt 27
Query: 539 ggtcctttagtccctgggagctctgg 564
||||||||||||||||||||||||||
Sbjct: 26 ggtcctttagtccctgggagctctgg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1071
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1061
Effective search space: 701321
Effective search space used: 701321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no289_c21.g1 MSMg01no289_c21.g1 CHROMAT_FILE:
MSMg01no289_c21.g1 PHD_FILE: MSMg01no289_c21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:23:26 2005
(295 letters)
>mm_chr5_84550233_84550927
Length = 695
Score = 547 bits (283), Expect = e-160
Identities = 292/295 (98%)
Strand = Plus / Plus
Query: 1 caaatgtgctagaaatagcagctgataaatctctgggagctatggttagccccaggtata 60
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 201 caaatgtgctagaaatagcagctgataaatctctgggagctatggttaggcacaggtata 260
Query: 61 tctgcattcctagattctcttaggacctggaaacctgcaagtaatgtcaggcactataag 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 tctgcattcctagattctcttaggacctggaaacctgcaagtaatgttaggcactataag 320
Query: 121 aagaggatgagtatcgaaggctaaaatcacttggccctttcaggcatataattcaaaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagaggatgagtatcgaaggctaaaatcacttggccctttcaggcatataattcaaaaca 380
Query: 181 tgttttctttttaataagaagcttctatttaccttctgacatgaaaatgtatttatcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgttttctttttaataagaagcttctatttaccttctgacatgaaaatgtatttatcttc 440
Query: 241 tgacattaaaatttgaaaacagagttttccacttctgtggtgtgtgtgtgtgtgt 295
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgacattaaaatttgaaaacagagttttccacttctgtggtgtgtgtgtgtgtgt 495
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 695
Length adjustment: 9
Effective length of query: 286
Effective length of database: 686
Effective search space: 196196
Effective search space used: 196196
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
