Query= MSMg01no290_p04.b1 MSMg01no290_p04.b1 CHROMAT_FILE:
MSMg01no290_p04.b1 PHD_FILE: MSMg01no290_p04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:37 2005
(318 letters)
>mm_chr5_145583627_145584344
Length = 718
Score = 586 bits (303), Expect = e-172
Identities = 309/311 (99%)
Strand = Plus / Plus
Query: 5 gaattctctgagtcttttgctcagccccagtgcagacttggtttgaagagagttgcctgt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctgagtcttttgctcagccccagtgcagacttggtttgaagagagttgcctgt 264
Query: 65 gcactggtcaggcaattgctgcccctgggtcatgtccactcatcagtcagctagatgacc 124
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gcactggtcagggaattgctgcccctgggtcatgtccactcatcagtcagctagatgacc 324
Query: 125 agcagctggataaccgtcccaggtaccctgaagtccaagttaagaggcaccttgcccctt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agcagctggataaccgtcccaggtaccctgaagtccaagttaagaggcaccttgcccctt 384
Query: 185 gtcatactagttcacatttaggctcagaattgggttggtctcatacatttttttcccctc 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 385 gtcatactagttcacatttaggctcagaattgggttggtctcatacattttttttccctc 444
Query: 245 ccatattacattctcgtgtaaaacttgggaagtgacagttactgataagcctcttgtaat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ccatattacattctcgtgtaaaacttgggaagtgacagttactgataagcctcttgtaat 504
Query: 305 aaatactaata 315
|||||||||||
Sbjct: 505 aaatactaata 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no290_p04.g1 MSMg01no290_p04.g1 CHROMAT_FILE:
MSMg01no290_p04.g1 PHD_FILE: MSMg01no290_p04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:37 2005
(287 letters)
>mm_chr5_145750609_145751295
Length = 687
Score = 528 bits (273), Expect = e-154
Identities = 285/291 (97%), Gaps = 4/291 (1%)
Strand = Plus / Minus
Query: 1 ctgggtgattgttgtgaatgaaagactttgtggatgattttgtgaatgactaaaggcagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ctgggtgattgttgtgaatgaaagactttgtggatgattttgtgaatgactaaaggcagg 381
Query: 61 ggtggactttgtaaataaatgcactcaagcacgattgaggaaatgaattaatgacagtag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 380 ggtggactttgtaaataaatgcactcaagcacgattgaggaaatgaattaatgacaggag 321
Query: 121 aggagggagatcttggccttttcaatgggtctgtgacctttcctcctggatcaggtctgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aggagggagatcttggccttttcaatgggtctgtgacctttcctcctggatcaggtctgc 261
Query: 181 ctctaactaaaacagcccccttaaggctggccagctgaagttccacgtgcacgggcgcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 260 ctctaactaaaacagcccccttaaggctggccagctgaagttccacgtgcacgcgcgcac 201
Query: 241 ----gcatgagtacacacacacacacacacacacacacacacacacacact 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 acacgcatgagtacacacacacacacacacacacacacacacacacacact 150
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
