TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCAGGACTTGCCGTTTGATCCTTCATAAAACTCACAGACACACATG
GAGCACTGCCTCCTGTTGTATAACCCAGCAAGGTCTAAGAGACCCACGTG
CACTTGGAGGTTAGTTGGCTGGGTTTACTCTGTTGTCTTTGAGATGGGGA
CTTGTGGTGGCCTTGTGCTCCAGATTCCCCCTCACAGGGATCTTGGGTGT
GTACCGCTTTGTCTGATGGTATATAACTTTACATACATTTTGGATCTAAC
TTGGGCCTCACAGACAGAACCTTTACCACTTATTACTAAGGCACTGGCAG
GTCCCAGGTAGGTCTGAAGCTAGTGGCTCTTAAATCCTTTGCACTGCTCA
ACGAAAACTGCTCTTCCCACCGCCTGCCCAGTGCCCAGCTTAGCTCCTAT
TGGCTCAGCCTGGACCTGTGGCAATGTCTCACTCTGGGCCTCTGTGCTGA
GAGGCCCCAAGGCCTCTGTCCAGGGCAGCACAAACAGGAAAGAGCCAGGA
TGACCTTGCAGGAGCCCAGCTTCCTGCAACCACATAGCCTCCTACACAGG
ATCCTGTCCCCACTCAGCATGAAACTGGGGGTGGAGGCAGAGCACTTAGT
GTGGAGTCTGTACACCTGGCTGTGACCCATCTCTGCTGACTGCAAGCAAT
GTGGAACACACATACACACACGTGCTCAAGAATATACTCTGGCATGTCAC
G

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTAAGCAGTCCATGGTCTGAGTGTA
CACCTGATGCATGGGGCTTTCTCCTATCCATAAACCATCCACACAGAGCA
GTGAAGGACTAGACCCCACCCTGCCAGTCAGGGACATGGGCTCCAGCAGC
AGAAGGCTGCCTAAATTCTCACAGCCAAGAAACAAAGTTTGAAACCACTC
CACATGACTCCAAAGCCCACCCTCACGGGTCACCACTGCATGTCGGCAGT
GTTGACAGACCTGCTATGGCCAGTGGGTACCAGACTCAGTGAGGTACCTC
ACCTGATAACCATTTTTTCCATCCCATCCTCCGCTGAAGGCTCCCAGTCC
CAGCCCTGGAAGGCACCCCCCCCACAAATCACGTGATGTGCCCAAAATTG
CACAGCAGGATACCAGTGGCCAAGCTTGGGGCCTTCCCTGACTTCCACTT
TCTGACTCTGCCCCTCCCCCACCCCACCATTCCTGCATGCTGCAGTGTCT
ACCCACCCCACACCCACCCCACACCCACCCCATTCTAGTTCCTAGAACTC
ACCTGTGGGCTCCACTGATGGCCAAGGGTTCCCTTTATGCGTTTCCTTTT
TCTAACGCCTTGCTCCCACCTTATTCCTTCCAATCCCCCAACACTAGGTA
AGAGAGGAAGAAAGTTGGCTTACTAAAGGAGGTTGTCCATATCCAGTATA
ACTTG

Query= MSMg01no291_h15.b1 MSMg01no291_h15.b1 CHROMAT_FILE:
MSMg01no291_h15.b1 PHD_FILE: MSMg01no291_h15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:16 2005
         (367 letters)



>mm_chr5_112727743_112728508
          Length = 766

 Score =  654 bits (338), Expect = 0.0
 Identities = 356/362 (98%), Gaps = 1/362 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccaggacttgccgtttgatccttcataaaactcacagacacacatggagcactgc 64
           |||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gaattccaggacatgatgtttgatccttcataaaactcacagacacacatggagcactgc 506

                                                                       
Query: 65  ctcctgttgtataacccagcaaggtctaagagacccacgtgcacttggaggttagttggc 124
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctcctgttg-ataacccagcaaggtctaagagacccacgtgcacttggaggttagttggc 447

                                                                       
Query: 125 tgggtttactctgttgtctttgagatggggacttgtggtggccttgtgctccagattccc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tgggtttactctgttgtctttgagatggggacttgtggtggccttgtgctccagattccc 387

                                                                       
Query: 185 cctcacagggatcttgggtgtgtaccgctttgtctgatggtatataactttacatacatt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 cctcacagggatcttgggtgtgtaccgctttgtctgatggtatataactttacatacatt 327

                                                                       
Query: 245 ttggatctaacttgggcctcacagacagaacctttaccacttattactaaggcactggca 304
           ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||
Sbjct: 326 ttggatctaacttgggcctcacagacagaaccagtaccacttattactaaggcactggca 267

                                                                       
Query: 305 ggtcccaggtaggtctgaagctagtggctcttaaatcctttgcactgctcaacgaaaact 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ggtcccaggtaggtctgaagctagtggctcttaaatcctttgcactgctcaacgaaaact 207

             
Query: 365 gc 366
           ||
Sbjct: 206 gc 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 766
Length adjustment: 9
Effective length of query: 358
Effective length of database: 757
Effective search space:   271006
Effective search space used:   271006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no291_h15.g1 MSMg01no291_h15.g1 CHROMAT_FILE:
MSMg01no291_h15.g1 PHD_FILE: MSMg01no291_h15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:16 2005
         (288 letters)



>mm_chr5_112540129_112540816
          Length = 688

 Score =  476 bits (246), Expect = e-139
 Identities = 276/286 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   taagcagtccatggtctgagtgtacacctgatgcatggggctttctcctatccataaacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 taagcagtccatggtctgagtgtacacctgatgcatggggctttctcatatccataaacc 260

                                                                       
Query: 61  atccacacagagcagtgaaggactagaccccaccctgccagtcagggacatgggctccag 120
           |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 atccacacagggcagtgaaggaccagaccccaccctgccagtcagggacatgggctccag 320

                                                                       
Query: 121 cagcagaaggctgcctaaattctcacagccaagaaacaaagtttgaaaccactccacatg 180
           ||||||||||||||||||||||||||||||||||| | ||||||||| ||| ||||||||
Sbjct: 321 cagcagaaggctgcctaaattctcacagccaagaagcgaagtttgaacccagtccacatg 380

                                                                       
Query: 181 actccaaagcccaccctcacgggtcaccactgcatgtcggcagtgttgacagacctgcta 240
           |||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 381 actccagagcccaccctcacgggtcaccactgcatgtcggcagcgttgacatacctgcta 440

                                                         
Query: 241 tggccagtgggtaccagactcagtgaggtacctcacctgataacca 286
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggccagtgggtaccagactcagtgaggtacctcacctgataacca 486


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space:   189441
Effective search space used:   189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)