Query= MSMg01no291_m19.b1 MSMg01no291_m19.b1 CHROMAT_FILE:
MSMg01no291_m19.b1 PHD_FILE: MSMg01no291_m19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:41 2005
(234 letters)
>mm_chr5_20057312_20057944
Length = 633
Score = 418 bits (216), Expect = e-121
Identities = 228/232 (98%), Gaps = 1/232 (0%)
Strand = Plus / Minus
Query: 1 taaatagaaattcttgctgatcaaatggaaagtgtcaacaaatgagcatgtctgagcagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 taaatagaaattcttgctgatcaaatggaaagtgtcaacaaatgagcatgtctgagcagt 372
Query: 61 tctgaaggaaaccaagctagacaaatatcctgtagaggcaagtccaccctccccagccct 120
||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 371 tctgaaggaaaccaagctagacaaatatcctgtagaggccagtccaccttccccagccct 312
Query: 121 gcctagaggataatcaacagggctgtcaacatttacatctatgaagaagctcccgggcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 311 gcctagaggataatcaacagggctgtcaacatttacatctatgaagaagctccggggcac 252
Query: 181 ctcacttttttttttttccatatgaaatgagctgttgagggaatgagttggg 232
|||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 251 ctcacttttttttttttc-atatgaaatgagctgttgagggaatgagttggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 633
Length adjustment: 9
Effective length of query: 225
Effective length of database: 624
Effective search space: 140400
Effective search space used: 140400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no291_m19.g1 MSMg01no291_m19.g1 CHROMAT_FILE:
MSMg01no291_m19.g1 PHD_FILE: MSMg01no291_m19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:41 2005
(229 letters)
>mm_chr5_19901187_19901815
Length = 629
Score = 441 bits (228), Expect = e-128
Identities = 228/228 (100%)
Strand = Plus / Plus
Query: 1 cagtgtccttccggcagctctgacaactgagccagctgccagtggttctatgacatcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagtgtccttccggcagctctgacaactgagccagctgccagtggttctatgacatcatt 260
Query: 61 atcctgatgcccaggaactatctaattctgaatattaaatattctacatattctagaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcctgatgcccaggaactatctaattctgaatattaaatattctacatattctagaaat 320
Query: 121 caaggaccacaaacttcactaatatcctttagagtattttagcatctatgctgcctaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caaggaccacaaacttcactaatatcctttagagtattttagcatctatgctgcctaagt 380
Query: 181 atttaaattactctaaaaatcaaagttgatttgacagagctcataaaa 228
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atttaaattactctaaaaatcaaagttgatttgacagagctcataaaa 428
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 629
Length adjustment: 9
Effective length of query: 220
Effective length of database: 620
Effective search space: 136400
Effective search space used: 136400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
