Query= MSMg01no292_b24.b1 MSMg01no292_b24.b1 CHROMAT_FILE:
MSMg01no292_b24.b1 PHD_FILE: MSMg01no292_b24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:27:06 2005
(632 letters)
>mm_chr5_14581766_14582797
Length = 1032
Score = 1205 bits (623), Expect = 0.0
Identities = 626/627 (99%)
Strand = Plus / Minus
Query: 6 aattcccaaaatagcctatgttaaccttaactaccctactattgaacagaaattgtgaag 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 968 aattcccaaaatagcctatgttaaccttaactaccctactattgaacagaaattgtgaag 909
Query: 66 acacacccagaaagaaggaaaaattttaatgagaaatgaaaatttatttttttcttaaaa 125
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 908 acacacccagaaagaaggaaaaattttaatgacaaatgaaaatttatttttttcttaaaa 849
Query: 126 tttatgtaatataattcaggtcaaataattgattcaaaatatgcttcttgtattgttttt 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 tttatgtaatataattcaggtcaaataattgattcaaaatatgcttcttgtattgttttt 789
Query: 186 attgttaatgcaactctgttgtagaacttacatttataagttagtaacaaaaataaacaa 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 attgttaatgcaactctgttgtagaacttacatttataagttagtaacaaaaataaacaa 729
Query: 246 gcatataaatacagataacttacaatgaatattaagataatattatgtatataaatgatg 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 gcatataaatacagataacttacaatgaatattaagataatattatgtatataaatgatg 669
Query: 306 catagacaaagcaagttctttaaatgttttcctcagaattctctaaattcacatcatgtg 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 catagacaaagcaagttctttaaatgttttcctcagaattctctaaattcacatcatgtg 609
Query: 366 gacacagcaaatttcattagaaataaaaagtaaactgcatactaatcttttttttaatat 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gacacagcaaatttcattagaaataaaaagtaaactgcatactaatcttttttttaatat 549
Query: 426 ttgacatgtaagccttgagggatatgattaaactactatgacacactaaaagttgattga 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 ttgacatgtaagccttgagggatatgattaaactactatgacacactaaaagttgattga 489
Query: 486 atttttcagcgttgtgacatcataagaatagaaacaaatgctacaaaatttcaattgtaa 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 atttttcagcgttgtgacatcataagaatagaaacaaatgctacaaaatttcaattgtaa 429
Query: 546 gctatttgcccatccttacttagaatcaacataaaaattgaagtatggcatgagaaataa 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 gctatttgcccatccttacttagaatcaacataaaaattgaagtatggcatgagaaataa 369
Query: 606 ggcaaattatttttattatttctgaat 632
|||||||||||||||||||||||||||
Sbjct: 368 ggcaaattatttttattatttctgaat 342
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no292_b24.g1 MSMg01no292_b24.g1 CHROMAT_FILE:
MSMg01no292_b24.g1 PHD_FILE: MSMg01no292_b24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:27:06 2005
(448 letters)
>mm_chr5_14530284_14531129
Length = 846
Score = 772 bits (399), Expect = 0.0
Identities = 433/445 (97%), Gaps = 2/445 (0%)
Strand = Plus / Plus
Query: 1 ttcgcttggattgaccggtttaaaaaaaaaatacaaacactaagcttcactccagatttc 60
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcgcttggattgaccggtaaaaaaaaaaaatacaaacactaagcttcactccagatttc 260
Query: 61 ctcttgctccgttatattgacagaggaagaaaattttaaaacatcaaaatagaatgaatg 120
||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcttgctctgttatattgacaggggaagaaaattttaaaacatcaaaatagaatgaatg 320
Query: 121 ataatgaaaacttagattaaatttgtttgaaacaacggcagagtaatgtaatgcccatga 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 321 ataatgaaaacttagattaaatttgtttgaaacaatggcagagtaatgtaatgcccatga 380
Query: 181 atcaggatttaaagcaccattccccagatctgtgtctgtgaatatgtgtttatgtgcatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atcaggatttaaagcaccattccccagatctgtgtctgtgaatatgtgtttatgtgcatc 440
Query: 241 tgtgcgacagctgaatcctttacaggttaaaagaggcaaaagctcccttagggaaatgta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtgcgacagctgaatcctttacaggttaaaagaggcaaaagctcccttagggaaatgta 500
Query: 301 cgtttttatgatatatatatatatatatacacacacattccccacaccttataaactgca 360
| ||||||||||||||||||||||||||||||||| || | ||| |||||||||||||
Sbjct: 501 catttttatgatatatatatatatatatacacaca--tttctgacatcttataaactgca 558
Query: 361 ttctttctttccaggccaatgcacacaaggtgatccctagagcttctggttaagttctta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ttctttctttccaggccaatgcacacaaggtgatccctagagcttctggttaagttctta 618
Query: 421 gcaagtattgagttcattttttttt 445
|||||||||||||||||||||||||
Sbjct: 619 gcaagtattgagttcattttttttt 643
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 846
Length adjustment: 10
Effective length of query: 438
Effective length of database: 836
Effective search space: 366168
Effective search space used: 366168
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
