CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTCACCTGAGCAATACTGAATGACAGAGAAGCACCTGAAAAATTGT
TCAACGTCCTTAATCATCAGGGAAATGCAATTCAAAAAAACCCTGAGATT
CCACCTCACACCAGTCAGAATGATTAAGATCAAAAATTCAGGTGACAGCA
GATGCTGGAGAGGATGTGGAGAAAGAAGAACACTCCTCCATTGTTGGTGG
GATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCAGTTCTCTCT
CTTTTTTTTAATGAAAATATTTTTGTCTTATGCAATATATCCTGACCACA
GTTTCCCCTCCAATCTAGCTATTCTCACTCCCTCTCTCTCCTAGATGCCC
CTCTGTTTCTTCTTCCCAACAGAGCAGACATGTAAGAGGTGACAGTCACA
TGGGAAAAAACAAGATACCCAGTAGGAGGAGAAGAGTTTCAATAGCAGGC
AAGAGTCAGAGATATACCTACTCCTACTTTTCGAAGTCTCACAAGATCAG
TAAGTTAAGAATTATAATATATGTGCAGAGGATCTGGAGCAGAACAATAC
AGGCTCAGTGCTTGTAGCTTCAGTGTCCCTGAGCCCATCTGAGCCCTGCT
TAGTTGATTCCATGGGCTATGTTATCTTAATGTCTTCCATCCTCTCTGAT
TCCTATAATCTTTCCTTCCCTCCTTCACAGGGTTCCCAAATCTCTAAGGG
A

CCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCAGGACTGCCAGGACTACACACAC
NAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAGAAAGAAATTTATTTTGTC
AAAAAGCTATCTGAATGGAATAAAGAGATTCATGCCAAATGAGTATAGAA
AGAAATATGTCAACAATGCTATGTGCACAATAATTTATATTTGTATTTAT
AGAACCAAATATGGATTTATAACAGAATACTACTATGTGTTCATATCTAT
TATCCATCTATCATCACCATTATCTGCTCAAATAGCAGTGAGAGTGCATG
TAGTTCTAAAGTCTATATTAAAGCACTGAAAAATATAACATTTGCCCTTT
CAGAACTCATACTTTAAGAACACGAGATAGATTACAATAAAGGAGAGAAT
GTAGGAAGAAAATGAGTGACCTGTGTTACTATCTTAATCTAAATGGGTAG
CAAGAGCTGTTCCTGAAGTTTTCTTTGCAAACTGTATGAAATGAGGAAGC
TGACCACAGAGCCACTAAGCGGAAGAAGAAACTAGGAAGGACAAAGTACC
ACGTATGCCTGGAGTTCCCTAATCCAGGCCACCATCTATTGATTAGATCT
GAGGAGTGAAACCTGTCCAATGGAAGCCACTTAGACATGCTTTTGGATCA
TTTTGAACAGAGTTGTGAATAATCAACATATTCCACCTATATATTGCAA

Query= MSMg01no292_k08.g1 MSMg01no292_k08.g1 CHROMAT_FILE:
MSMg01no292_k08.g1 PHD_FILE: MSMg01no292_k08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:27:46 2005
         (632 letters)



>mm_chr5_13272707_13273738
          Length = 1032

 Score = 1102 bits (570), Expect = 0.0
 Identities = 619/639 (96%), Gaps = 8/639 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   caggactgccaggact------acacacacnaaaaaaaaaaaaaaaaaaaaagaaaagaa 54
           |||||| |||||||||      |||||||| |||||||||||||||||||||||||||||
Sbjct: 904 caggacagccaggactacacacacacacacaaaaaaaaaaaaaaaaaaaaaagaaaagaa 845

                                                                       
Query: 55  agaaagaaatttattttgtcaaaaagctatctgaatggaataaagagattcatgccaaat 114
           ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 844 agaaagaaattcattttgtc-aaaagctatctgaatggaataaagagattcatgccaaat 786

                                                                       
Query: 115 gagtatagaaagaaatatgtcaacaatgctatgtgcacaataatttatatttgtatttat 174
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 gagtatagaaagaaatatgtcaacaatgctatgtgcacaataatttatatttgtatttat 726

                                                                       
Query: 175 agaaccaaatatggatttataacagaatactactatgtgttcatatctattatccatcta 234
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 agaaccaaatatggatttataacagaatactactatgtgttcatatctattatccatcta 666

                                                                       
Query: 235 tcatcaccattatctgctcaaatagcagtgagagtgcatgtagttctaaagtctatatta 294
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 tcatcaccattatctgctcaaatagcagtgagagtgcatgtagttctaaagtctatatta 606

                                                                       
Query: 295 aagcactg-aaaaatataacatttgccctttcagaactcatactttaagaacacgagata 353
           |||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 605 aagcactgaaaaaatataacatttgccctttcagaactcatactttaagaagaggagata 546

                                                                       
Query: 354 gattacaataaaggagagaatgtaggaagaaaatgagtgacctgtgttactatcttaatc 413
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 gattacaataaaggagagaatgtaggaagaaaatgagtgacctgtgttactatcttaatc 486

                                                                       
Query: 414 taaatgggtagcaagagctgttcctgaagttttctttgcaaactgtatgaaatgaggaag 473
           |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 485 taaatgagtagcaagagctgttcctgaagttttctttgcaaattgtatgaaatgaggaag 426

                                                                       
Query: 474 ctgaccacagagccactaagcggaagaagaaactaggaaggacaaagtaccacgtatgcc 533
           ||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ctgaccacagagctactaaccagaagaagaaactaggaaggacaaagtaccacgtatgcc 366

                                                                       
Query: 534 tggagttccctaatccaggccaccatctattgattagatctgaggagtgaaacctgtcca 593
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 365 tggagttccctaatccaggccaccatctattgattagatctgaggagcgaaacctgtcca 306

                                                  
Query: 594 atggaagccacttagacatgcttttggatcattttgaac 632
           ||||||||||||||||||||||||||||| |||||||||
Sbjct: 305 atggaagccacttagacatgcttttggatgattttgaac 267


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space:   635684
Effective search space used:   635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)