XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCAC
TGGGAGCCACAAAAAGGGCTGCTATTCACAACTGTCAGCTAAGGACAAAG
ATTGCAGGTCCTGACAGCTAGTCAGGAAAGATACCAAAACAAAACAACTC
CAGAACAAAGCAAACAAAAACAGAAAGCAAATTGAGCCCAAGTTTAGTCA
CCCTCCTTGACCAGTATGTAGTAACTTAAGTGAGGTGGCATCTTGAGCTC
GCTGAGGAACTGACCCAGGAGGTTGCATAATTTCCCAAGGTTAGTTTTTA
GGAATGGGGGAGTAAGTCATCGATAAAGACCCTGAGGTCCTGCTCAGTAA
AGAGAGATTACATTAGGACATGGTTGCCTCCAGCCTGGATCTTAGCACTG
GGGAGCTGAGAAAACAGAGCTTAGGCTCAGACTGAAGAAGCTACAGGGAG
TTTAATGCCAGGCTAGCATGTTGAGACCCCTTTCTCCCTCCACCACAGGG
AAAAATACAGTTCCTACATGAAATTGAATTTCTTTTGTTAGATATTCCAA
ATACGTTAGCAAAGGAGCAACGGCGAGTCCCAGGAGGCTTGAGCGGTAGA
TGGGACGGGTTTTAAGGTTAGTTATCTTGAGTGGGCTTGAAAATATTAGG
CTCAATACTTTACAAATGTACAATGTTGTGTGGATTTTTCCCTGATTTAT
TGTTTTATGTTTATGTGTTTTATATGTGCATCACACATGTG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXCAGGCCACCCTGGGCTATAGAGTGAAACCCTC
TCTGAAAACCAAAACCTAAAACCAAAAAAATCAACAATGGGAAGATAAAA
CAAAAATCTTGTTCTTCTCTCTAAAGACTCCCCCCCCCCCCCAAGACAGG
GTTTCTCTGTATAGTCCTTGCTGTCCTGGAACTCACTTTGTAGACCAGGC
TGGCCTCGAACTCAGAGATCCGCCTGTTCTCTGCCTCCCGAGTGTTGGGA
TTAAAGGCGTGCACCACCATGCCTGGCTTCTAAAGACTTTCATGTCTGCC
TTTTCATATTTATAACTAGACTCGCCAAAAATGAATTGCAGTGATTTTTG
TTTAGATGCACAAAAACCCAAAGCAAATGAGGCTACGTCTTGTTAGTTTA
GGCACCCCAACCAATAGGTGTATACAAGCTTTCTTGCTATGTATATGTGA
AATAAATAAGTGGAAAGGAGAGTCCCAAAAGAGTACGTAGAAATTTCTGC
TAATAGTGGGTGGCCTTTTCTTTGTCAGGACCAAAATGTCTTTGACTCCA
AGAAGAAAGTGAAATTAACCAATGCAGAAGGAGTGGAGTTCAAGCTCTCA
AAGAGACAGCTGCAAGCCATAGAGTTTAACAAAGCTTTGCTTGCCATGTA
TACAAACCAGGTAAGTCTGTTTTCTGTCTGGCTGACCTGGA

Query= MSMg01no294_c13.b1 MSMg01no294_c13.b1 CHROMAT_FILE:
MSMg01no294_c13.b1 PHD_FILE: MSMg01no294_c13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:29:46 2005
         (664 letters)



>mm_chr5_77429098_77430161
          Length = 1064

 Score = 1230 bits (636), Expect = 0.0
 Identities = 654/660 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccactgggagccacaaaaagggctgctattcacaactgtcagctaaggacaaaga 64
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 864 gaattccactgggagccacaaaaagggctgctattcacaattgtcagctaaggacaaaga 805

                                                                       
Query: 65  ttgcaggtcctgacagctagtcaggaaagataccaaaacaaaacaactccagaacaaagc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 ttgcaggtcctgacagctagtcaggaaagataccaaaacaaaacaactccagaacaaagc 745

                                                                       
Query: 125 aaacaaaaacagaaagcaaattgagcccaagtttagtcaccctccttgaccagtatgtag 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 aaacaaaaacagaaagcaaattgagcccaagtttagtcaccctccttgaccagtatgtag 685

                                                                       
Query: 185 taacttaagtgaggtggcatcttgagctcgctgaggaactgacccaggaggttgcataat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 taacttaagtgaggtggcatcttgagctcgctgaggaactgacccaggaggttgcataat 625

                                                                       
Query: 245 ttcccaaggttagtttttaggaatgggggagtaagtcatcgataaagaccctgaggtcct 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttcccaaggttagtttttaggaatgggggagtaagtcatcgataaagaccctgaggtcct 565

                                                                       
Query: 305 gctcagtaaagagagattacattaggacatggttgcctccagcctggatcttagcactgg 364
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 564 gctcagtaaagagagattacattaggacatggttgcctccggcctggatcttagcactgg 505

                                                                       
Query: 365 ggagctgagaaaacagagcttaggctcagactgaagaagctacagggagtttaatgccag 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ggagctgagaaaacagagcttaggctcagactgaagaagctacagggagtttaatgccag 445

                                                                       
Query: 425 gctagcatgttgagacccctttctccctccaccacagggaaaaatacagttcctacatga 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gctagcatgttgagacccctttctccctccaccacagggaaaaatacagttcctacatga 385

                                                                       
Query: 485 aattgaatttcttttgttagatattccaaatacgttagcaaaggagcaacggcgagtccc 544
           |||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 384 aattgagtttcttttgttagatattccaaatatgttagcaaaggagcgacggcgagtccc 325

                                                                       
Query: 545 aggaggcttgagcggtagatgggacgggttttaaggttagttatcttgagtgggcttgaa 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aggaggcttgagcggtagatgggacgggttttaaggttagttatcttgagtgggcttgaa 265

                                                                       
Query: 605 aatattaggctcaatactttacaaatgtacaatgttgtgtggatttttccctgatttatt 664
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 264 aatattaggctcaatactttacaaatgtacaatgttgtgtggattttttcctgatttatt 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space:   689316
Effective search space used:   689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)