Query= MSMg01no294_l11.b1 MSMg01no294_l11.b1 CHROMAT_FILE:
MSMg01no294_l11.b1 PHD_FILE: MSMg01no294_l11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:27 2005
(316 letters)
>mm_chr5_81870850_81871565
Length = 716
Score = 551 bits (285), Expect = e-161
Identities = 306/313 (97%), Gaps = 1/313 (0%)
Strand = Plus / Plus
Query: 4 ggaattccattcatgcccaaagctattttaatcacacctatacccttttctccccatgac 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccattcatgcccaaagctattttaatcacacctatacccttttctccccatgac 263
Query: 64 ttgattgtatccacttcctactccatatctccttgcaactttgtgtcctcttatttgtgc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttgattgtatccacttcctactccatatctccttgcaactttgtgtcctcttatttgtgc 323
Query: 124 tgtagctaaacttgtaggtgtgggatcatctgcagtttaccacagaccacactctgaagg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgtagctaaacttgtaggtgtgggatcatctgcagtttaccacagaccacactctgaagg 383
Query: 184 agaactgactctctatccccaagatgatgtgaccagcttctcagctaagggtgggggtgc 243
||||||||||||| |||| | ||||||| | ||||||||||||||||||||||||| |||
Sbjct: 384 agaactgactctccatccgcgagatgatatcaccagcttctcagctaagggtgggg-tgc 442
Query: 244 ctgtgcctttctctgttctgtattggaacttcgacttgccttgatcttgtgcaggcaatc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 443 ctgtgcctttctctgttctgtattggaacttcgacttgccttgatcttgtgcaggcagtc 502
Query: 304 acagctgcagaga 316
|||||||||||||
Sbjct: 503 acagctgcagaga 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no294_l11.g1 MSMg01no294_l11.g1 CHROMAT_FILE:
MSMg01no294_l11.g1 PHD_FILE: MSMg01no294_l11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:27 2005
(288 letters)
>mm_chr5_82045273_82045960
Length = 688
Score = 536 bits (277), Expect = e-157
Identities = 287/293 (97%), Gaps = 5/293 (1%)
Strand = Plus / Minus
Query: 1 ctaagcttccagatctcagagtgattttcttttgtcttgtttaaggttgatatttaacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 ctaagcttccagatctcagagtgattttcttttgtcttgtttaaggttgatatttaacaa 418
Query: 61 gtacatgcagaccgatcgatgcggcactacttttaattcttaaaattagattatgacagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gtacatgcagaccgatcgatgcggcactacttttaattcttaaaattagattatgacagg 358
Query: 121 taggagaaaataacgtgtcctccaagtgggcttgagaggatactcaggagacactggtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 taggagaaaataacgtgtcctccaagtgggcttgagaggatactcaggagacactggtgt 298
Query: 181 tttaggaagtaagaggaacatcccccggggaaggtgtatgataagtacctcagttcggag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 tttaggaagtaagaggaacatcccccggggaaggtgtatgataagtacctcagttcggag 238
Query: 241 ctgtctagaggttttgagaagcttggaatcctgag-----caaactgtctgtg 288
|| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 237 ctatctagaggttttgagaagcttggaatcctgagcattacaaactgtctgtg 185
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
