TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTTCAATCCCCTAAACATGCGGAGCAAACATTTAAAAAAATGGAAA
ACTACTTGAGGCACATATCAACTCCGTGACGTCATTTTAGTCGCTGGCGA
CCGCAGGATTCCAGCTCACAGGTGACTGTTCTCTACTTTTCCACTGTTCT
CATACATGAAGTGTTCCCTAGGTAACGTCACCCGTTACCTGTGTGGTGAG
GTGAGTGAGGTACACCAGGTAACCCTCAGGCCTCAGGGCGGTGATCTGCC
TCTCAGAATGTCTATGAAGAAAACCGCATGTGCGATTGCTTAATACAAAT
GTCTGTGTTTTCTTTTGTGGAAACACGGGCGTCGGCCTCAGGTCAGTCAG
CACTGTTTGCTGTAGATGTCATCCATAGCAAACAGTTTTCATGCATGTTA
AATACTCATTAAGTGCTTTAAATAAGCTTGATGGAAATTAGAGTTTGTGG
ATAGCCAGAACGGAAAACACACAAAAAACAGAGTTCGCAAAAATCTTAAC
AGTTTTTCTTTTCTCTCTTTAATGCTGTGGGTGAACCAGGCCTGCGTGTT
AGCCGTGTTAGCTCTGACCACCCAAGTTCCCTGCCCCTCAGCAAGTTGTA
AAACCCCCACGTATTCCCTGATTTGTTTTCCGATCCCCACAATGGTGGCA
GTGGTGACCCCTTAACACAAACAACATATTCTAAAGGTAAAAAGAACAN

CGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACGTGGGAAGTAAGAGGCAG
GTGGATCTCTGTGAGACTACACAGTGACGGTGATGGTTTGTATATGCTTG
GCCCAGGGTGTGGCATCATTAGGAGGTGTGCCCTTGTTGGAGTAGGATGT
CATTGTGGGTATGGGCTTTAAGACTATTGTCCTAGCTGCCTGGGAGCCAG
CCATCTCATAGCAGCCTTTAGATAAAGAGACAGAACTCTCAGCTCCTCCG
GCACCATGCCTGCCTGGACACTGTCATGCTCCTGCCTTGATGATAATGGA
CCGAACCTCTTAATGGNTCACCAGNCCGAACTCCATGTTGTCTAAGAAGT
GCTGTGGTCATGGTGTCTGCTCACAAAAAAAAAACCCTCACTAAGACGGT
GAGTTCCAGGCCAGTTAGGGCTATAGTGATGCCCTGTCTGAAAAAGAACA
AAACTAAAAACAGAACAAATCCCCAAAATTTGATTTGTTTTGACGATTTT
GTTTTAGATGCTAGGAATGAAACCTAGGGCTTTGAGCATGCTAGACTAGC
ACTCTGTCTCTGAGTTACAGAACCCAGTCTTTTCTTTCCAAAAAAAAAAA
AAAGATTTATTTATTTGTTTTATGTATATGAGTACACTATAGCTGTACAG
ATGGTTGTGAGCCTTCATGTGGTTGTTGGGAATTGAATTTAGGA

Query= MSMg01no296_p16.b1 MSMg01no296_p16.b1 CHROMAT_FILE:
MSMg01no296_p16.b1 PHD_FILE: MSMg01no296_p16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:18 2005
         (616 letters)



>mm_chr5_65532441_65533454
          Length = 1014

 Score = 1075 bits (556), Expect = 0.0
 Identities = 601/616 (97%), Gaps = 2/616 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtcattttagtcgctggcgaccgcaggattccagctcacaggtgactgttctctactttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtcattttagtcgctggcgaccgcaggattccagctcacaggtgactgttctctactttt 260

                                                                       
Query: 61  ccactgttctcatacatgaagtgttccctaggtaacgtcacccgttacctgtgtggtgag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccactgttctcatacatgaagtgttccctaggtaacgtcacccgttacctgtgtggtgag 320

                                                                       
Query: 121 gtgagtgaggtacaccaggtaaccctcaggcctcagggcggtgatctgcctctcagaatg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgagtgaggtacaccaggtaaccctcaggcctcagggcggtgatctgcctctcagaatg 380

                                                                       
Query: 181 tctatgaagaaaaccgcatgtgcgattgcttaatacaaatgtctgtgttttcttttgtgg 240
           |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 tctatgaagaaaactgcatgtgcgattgctaaatacaaatgtctgtgttttcttttgtgg 440

                                                                       
Query: 241 aaacacgggcgtcggcctcaggtcagtcagcactgtttgctgtagatgtcatccatagca 300
           |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaacacaggcgtcagcctcaggtcagtcagcactgtttgctgtagatgtcatccatagca 500

                                                                       
Query: 301 aacagttttcatgcatgttaaatactcattaagtgctttaaataagcttgatggaaatta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aacagttttcatgcatgttaaatactcattaagtgctttaaataagcttgatggaaatta 560

                                                                       
Query: 361 gagtttgtggatagccagaacggaaaacacacaaaaaacagagttcgcaaaaatcttaac 420
           |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| || 
Sbjct: 561 gagtttgtggatagccagaagggaaaacacacaaaaaatagagttcgcaaaaatctaaat 620

                                                                       
Query: 421 agtttttcttttctctctttaatgctgtgggtgaaccaggcctgcgtgttagccgtgtta 480
           |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |
Sbjct: 621 agtttttcttttctctctttaatgctgtgggtgaaccaggcctgcgtgctagccgtgc-a 679

                                                                       
Query: 481 gctctgaccacccaagttccctgcccctcagcaagttgtaaaacccccacgtattccctg 540
            ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 -ctctgaccacctaagttccctgcccctcagcaagttgtaaaacccccacgtattccctg 738

                                                                       
Query: 541 atttgttttccgatccccacaatggtggcagtggtgaccccttaacacaaacaacatatt 600
           |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 739 atttgttttccgatccccacgatggtggcagtggtgactccttaacacaaacaacatatt 798

                           
Query: 601 ctaaaggtaaaaagaa 616
           ||||||||||||||||
Sbjct: 799 ctaaaggtaaaaagaa 814


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1014
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1004
Effective search space:   608424
Effective search space used:   608424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)