CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCACCCTTTGTCCAGCATAATATAGGTTTCTTTGTCCCCTTTGGAA
TTCTATATTTATTACCATTGAGTAGTACCCAGTTGAGGTTCCGATTGAGC
CTTCTCAGAGATGGGCTGTAATTTTTTTTCACACTGGAAACCTGGATATA
TTCCACTAGACAGAGTTTGTAGTAGAAAAACCTTCCTAAATAAATTGATA
CAAACCCAAACCTAGCACTAAACACCAGAAGATAGACATTTTCTTTTATT
TAGACTTTACTGTTTGAAACTATGTAAAGCTATAAAGCCAGCTAAGCTTC
GTTTTATTTTCTGTCAATATAAAATACATAGATACAGCTACCTCATCATT
ATTATTTTAAATATGAGGACAAATGCGCCTCTGTCTGTCGTTTTTTCAAT
ATATATATCATTATAAAGCTTCAGGTTTATAATATATATAAAACATGAAG
CTTTATAATGCTATATGCATATGATTACTTTAAAACACATCACTTGATTT
GGATTAATTTATCTAAAATAAAAAAGAATAACAAAATTTTTGCTATTACA
AACACAACTCATTATTAGGCTAAGACAGTTTGAGTGGCAGACATGAGGTG
GAAATTGAATGTAGATTTAAGTATTTCTATACTATTGCCTATGTTGACAT
AAAACACTCATTAGTATGTCATCACTAGCTAAT

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXAGTAAGAATGTAACCTATTCAGTAAC
ATTCTAATTTACCTCTAGTAGAGACAGTAAAAAGAATCAGGCATTACAAT
TTACTTGAATAAGAGCTAGAAAGCTCAGGGCTAGTCTACCTAGTAATTAC
TTAGAACAATAGCCGAGTCACAACCATACACAGGAATACACAATTGCCTA
GGAAATAGGTGGGTTGTAGTATTATTCATGAAAGGGTTAGTAGAATGGAA
TTCCCCTGATGCAGGTTTTTCACTAGGCCCAGAGGAATAGCATAATCAGG
TATTTACTAAAGGACCCCTGGTGGTGAGTTTAACAATAGACTAGCATTGC
ATCAGAGCTTTCAGCTGGCTCCTGTGTTTAGCTGATCTTAATTAAGGGTT
GTTCCTATTCTCAGTTCTAAACACAGCCTGGCTCCTGCCATCTTTTTATG
TATGTATTTTCTTTGTTTTGAGTAAAGAACCAATGTACCTTGGTGGATGT
ATTCGCCTAGCTTTCTTGTTTTTCTTCTGTATTATAAGACTGGTGCTTGC
TTTGAGAAAATACATTCAGATACACACTCTCTCTGTGTCCATATCTGTTT
GTCATCCACGCCAACTCTTTGCCCACCTGTCCGGAAACCTAATTTCCTGT
GGATTAAGGGTTGCCACCAACTGTGACCAGTCC

Query= MSMg01no297_i13.b1 MSMg01no297_i13.b1 CHROMAT_FILE:
MSMg01no297_i13.b1 PHD_FILE: MSMg01no297_i13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:34:00 2005
         (618 letters)



>mm_chr5_18761183_18762204
          Length = 1022

 Score =  833 bits (431), Expect = 0.0
 Identities = 558/623 (89%), Gaps = 44/623 (7%)
 Strand = Plus / Plus

                                                                       
Query: 4   gaattctcaccctttgtccagcataatataggtttctttgtcccctttggaattctatat 63
           |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaatactcaccctttgttcagcataatataggtttctttgtcccctttggaattctatat 263

                                                                       
Query: 64  ttattaccattgagtagtacccagttgaggttccgattgagccttctcagagatgggctg 123
            ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 264 atattaccattgagtagtacccagttgaggttccaattgagccttctcagagatgggctg 323

                                                                       
Query: 124 ta--attttttttcacactggaaacctggatatattccactagacagagtttgtagtaga 181
           ||   ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 324 tatttttttttttcacacaggaaacctggatgtattccactagacagagtttgtagtaga 383

                                                                       
Query: 182 aaaaccttcctaaataaattgatacaaacccaaacctagcactaaacaccagaagataga 241
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aaaaccttcctaaataaaatgatacaaacccaaacctagcactaaacaccagaagataga 443

                                                                       
Query: 242 cattttcttttatttagactttactgtttgaaactatgtaaagctataaagccagctaag 301
           |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 444 cattttctttgatttagactttactgtttgaaactatgtaaagctataaacccagctaag 503

                                                                       
Query: 302 cttcgttttattttctgtcaatataaaatacatagatacagctacctcatcattattatt 361
           |||| ||||||||||||||||| |||||||||||||||||||||||| || |||||||||
Sbjct: 504 cttcattttattttctgtcaatgtaaaatacatagatacagctaccttataattattatt 563

                                                                       
Query: 362 ttaaatatgaggacaaatgcgcct----ctgtctgtcgttttttcaatatatatatcatt 417
           ||||||||||||||||||| |  |    |||||||||||||||||| |||          
Sbjct: 564 ttaaatatgaggacaaatgtg--tgtttctgtctgtcgttttttca-tat---------- 610

                                                                       
Query: 418 ataaagcttcaggtttataatatatataaaacatgaagctttataatgctatat--gcat 475
                ||         ||| | |||||||    ||    ||||||||| |||||  ||||
Sbjct: 611 -----gc---------ata-tgtatataa----tg----tttataatgatatatatgcat 647

                                                                       
Query: 476 atgattactttaaaacacatcacttgatttggattaatttatctaaaataaaaaagaata 535
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 atgattactttaaaacacatcacttgatttggattaatttatctaaaataaaaaagaata 707

                                                                       
Query: 536 acaaaatttttgctattacaaacacaactcattattaggctaagacagtttgagtggcag 595
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 acaaaatttttgctatgacaaacacaactcattattaggctaagacagtttgagtggcag 767

                                  
Query: 596 acatgaggtggaaattgaatgta 618
           |||| |||  |||||||||||||
Sbjct: 768 acataaggcagaaattgaatgta 790


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1022
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1012
Effective search space:   615296
Effective search space used:   615296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)