CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCACCCTTTGCTCAGCATAATATAGGTTTCTTTGTCCCCTTTGGAA
TTCTATATTTATTACCATTGAGTAGTACCCAGTTGAGGTTCCGATTGAGC
CTTCTCAGAGATGGGCTGTAATTTTTTTTCACACTGGAAACCTGGATATA
TTCCACTAGACAGAGTTTGTAGTAGAAAAACCTTCCTAAATAAATTGATA
CAAACCCAAACCTAGCACTAAACACCAGAAGATAGACATTTTCTTTTATT
TAGACTTTACTGTTTGAAACTATGTAAAGCTATAAAGCCAGCTAAGCTTC
GTTTTATTTTCTGTCAATATAAAATACATAGATACAGCTACCTCATCATT
ATTATTTTAAATATGAGGACAAATGTGTTTCTGTCTGTCGTTTTTTCAAT
ATATATATCATTATAAAGCTTCAGGTTTATAATATATATAAAACATGAAG
CTTTATAATGCTATATGCATATGATTACTTTAAAACACATCACTTGATTT
GGATTAATTTATCTAAAATAAAAAAGAATAACAAAATTTTTGCTATTACA
AACACAACTCATTATTAGGCTAAGACAGTTTGAGTGGCAGACATGAGGTG
GAAATTGAATGTAGTTTTAAGTATTTCTATACTATTGCCTATGTTGTCAT
AAAACACTCATTAGTATGTCATCACTAGCTAAT

CCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAGTAAGAATGTAACCTATTCAGTA
ACATTCTAATTTACCTCTAGTAGAGACAGTAAAAAGAATCAGGCATTACA
ATTTACTTGAATAAGAGCTAGAAAGCTCAGGGCTAGTCTACCTAGTAATT
ACTTAGAACAATAGCCGAGTCACAACCATACACAGGAATACACAATTGCC
TAGGAAATAGGTGGGTTGTAGTATTATTCATGAAAGGGTTAGTAGAATGG
AATTCCCCTGATGCAGGTTTTTCACTAGGCCCAGAGGAATAGCATAATCA
GGTATTTACTAAAGGACCCCTGGTGGTGAGTTTAACAATAGACTAGCATT
GCATCAGAGCTTTCAGCTGGCTCCTGTGTTTAGCTGATCTTAATTAAGGG
TTGTTCCTATTCTCAGTTCTAAACACAGCCTGGCTCCTGCCATCTTTTTA
TGTATGTATTTTCTTTGTTTTGAGTAAAGAACCAATGTACCTTGGTGGAT
GTATTCGCCTAGCTTTCTTGTTTTTCTTCTGTATTATAAGACTGGTGCTT
GCTTTGAGAAAATACATTCAGATACACACTCTCTCTGTGTCCATATCTGT
TTGTCATCCACGCCAACTCTTTGCCCACCTGTCCGGAAACCTAATTTCCT
GTGGATTAAGGGTTGCCACCAACTGTGACCAGTC

Query= MSMg01no297_l18.b1 MSMg01no297_l18.b1 CHROMAT_FILE:
MSMg01no297_l18.b1 PHD_FILE: MSMg01no297_l18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:34:14 2005
         (685 letters)



>mm_chr5_18761182_18762270
          Length = 1089

 Score =  969 bits (501), Expect = 0.0
 Identities = 625/687 (90%), Gaps = 40/687 (5%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctcaccctttgctcagcataatataggtttctttgtcccctttggaattctatat 64
           |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaatactcaccctttgttcagcataatataggtttctttgtcccctttggaattctatat 264

                                                                       
Query: 65  ttattaccattgagtagtacccagttgaggttccgattgagccttctcagagatgggctg 124
            ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 265 atattaccattgagtagtacccagttgaggttccaattgagccttctcagagatgggctg 324

                                                                       
Query: 125 ta--attttttttcacactggaaacctggatatattccactagacagagtttgtagtaga 182
           ||   ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 325 tatttttttttttcacacaggaaacctggatgtattccactagacagagtttgtagtaga 384

                                                                       
Query: 183 aaaaccttcctaaataaattgatacaaacccaaacctagcactaaacaccagaagataga 242
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaaaccttcctaaataaaatgatacaaacccaaacctagcactaaacaccagaagataga 444

                                                                       
Query: 243 cattttcttttatttagactttactgtttgaaactatgtaaagctataaagccagctaag 302
           |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 445 cattttctttgatttagactttactgtttgaaactatgtaaagctataaacccagctaag 504

                                                                       
Query: 303 cttcgttttattttctgtcaatataaaatacatagatacagctacctcatcattattatt 362
           |||| ||||||||||||||||| |||||||||||||||||||||||| || |||||||||
Sbjct: 505 cttcattttattttctgtcaatgtaaaatacatagatacagctaccttataattattatt 564

                                                                       
Query: 363 ttaaatatgaggacaaatgtgt--ttctgtctgtcgttttttcaatatatatatcattat 420
           ||||||||||||||||||||||  |||||||||||||||||||| |||            
Sbjct: 565 ttaaatatgaggacaaatgtgtgtttctgtctgtcgttttttca-tat------------ 611

                                                                       
Query: 421 aaagcttcaggtttataatatatataaaacatgaagctttataatgctatat--gcatat 478
              ||         ||| | |||||||    ||    ||||||||| |||||  ||||||
Sbjct: 612 ---gc---------ata-tgtatataa----tg----tttataatgatatatatgcatat 650

                                                                       
Query: 479 gattactttaaaacacatcacttgatttggattaatttatctaaaataaaaaagaataac 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 gattactttaaaacacatcacttgatttggattaatttatctaaaataaaaaagaataac 710

                                                                       
Query: 539 aaaatttttgctattacaaacacaactcattattaggctaagacagtttgagtggcagac 598
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 aaaatttttgctatgacaaacacaactcattattaggctaagacagtttgagtggcagac 770

                                                                       
Query: 599 atgaggtggaaattgaatgtagttttaagtatttctatactattgcctatgttgtcataa 658
           || |||  |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 771 ataaggcagaaattgaatgtagttttaagtatttctatactattgcctatgttgtcatga 830

                                      
Query: 659 aacactcattagtatgtcatcactagc 685
           |||||||||| ||||||||||||||||
Sbjct: 831 aacactcatttgtatgtcatcactagc 857


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1089
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1079
Effective search space:   728325
Effective search space used:   728325
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)