TTGAAATAXXXXXXXXXXXXXXXXXXXXXXXXTTTCGCAGTCCGCGGNAT
TCTTTGTTCAGTTCCGAAACACATAANAAAAGAGATTGTTGAACATTAAC
TAACTATTATCTTTTAGATTTCCTCTAGCTAAGTAGATTTTATTATTCTA
TATAATTCACGACATAATATTTAAATCTAGCCTCTTGATTGTTTCTGCTT
TATCTTCTTCTTTTTTATAATGTTTTTTTTTTTCTTCTTTTTTCTTCTTT
TGTCCTTCTTATCTATTTTTTTTTTTTACTTTACTTTACCCCAATTATAC
CGATTGTACTTGTTCATTATGCTGATTTTCTCATGCGCGTTTTTGTTTTT
GTTTTCTTCTTTAACACTAATTTTTAACATATTTATTCTTATTAAACCTT
ATTCTTTTTATATCAACCTATTCCTTTTTTTTTCCTTATTTTTTTTATAT
ATCTAATTTATTATACTTCTTCACTTTTTTTCTTTTAAATTTATCCCCCT
ATATAAATTTTTTTAAATTTTTTTAATAAATCTTAATTACTTAAATTTGT
ATTAATATATATTTTAGACTTGCCTTTTGTCTATTTTTTATATCTATCGT
TTTTCTTTATTGTATATATATTATTTCTTATCTCCGCATTTTAATATTTT
TCTTCCCCTTTCCTGTTTGCTCCGATATACTCTTTATTTATTATAGACTT
TTCTTTTGCGGATTCCAAATTTTTTTTTATGTTTATCCCTTTTTTTTTTT
AACTTTGACCTTTCTGCTTATCATTTTCATACTCTATTTATCTTGTCCTC
ATTCTTCTTTTTTTTTTATTTCCCTCATTTTATCAGTCTCATCTTTTTAT
TTCTCCTTATTATATCCTTTTCTTATACTAATTTATATTATTCTAATTTA
TCTNCTTTCTTGTCTTGN

NCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCACGTGACTAATGTGGGGTGGTGT
GTTTCTCTCAAGTCCTTTCAGGCCAAAGGCACTGAGGCAGGAGGGATACA
AAGTTTGCTGCAACTGCTTTGAATATAGGCAGAACATGGATTTTTCTGAG
AAGAAAAGCGTTATCAGGTGTAACGAATATACAAGAGAGGGGGAGGTCAT
AAAATTTAAGCCTATCAAGAAGAGAAGTAAAACCTGGTGAGAATGATGGG
TAGTAGAGAGGTAGTTGGTCTGTTAGTGGAGGATGGGTCACTAGGTATTG
GAGTCTTGTTTAAAGTAGCATTTATTTTAATATAAATTGTATTTACGTAC
GTTGGATCTTATTTCAAGTACCTGTGAAAAATCAACTGACCACATCTAAT
GTTTCTGAAATTCACAAATTCAAGTATTTAAATAAATATTCCAACACAGA
TAATGGTAAGTATTGAACATTAATATGGACTTATGTTTATATTATTAATA
TAGTAATATCTTATTAACCCTGAAAAGCCAAATCTCAACAACACACAATT
CCGGTTCACAGCATAGTGTTGTAGAGGTAGCTAGGATTATCAAAATCAAA
GCATAGTTTAAAATAGCTACTTTTAGTGTTCCAGTATATGCTTATTCAGT
TTTCCAAACCGAATAAGGGAACCAGGAAGCCATTTATCAGTACAGATGAG
AT

Query= MSMg01no298_k23.g1 MSMg01no298_k23.g1 CHROMAT_FILE:
MSMg01no298_k23.g1 PHD_FILE: MSMg01no298_k23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:35:25 2005
         (528 letters)



>mm_chr5_72603934_72604866
          Length = 933

 Score =  948 bits (490), Expect = 0.0
 Identities = 517/528 (97%), Gaps = 5/528 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   tgactaatgtggggtggtgtgtttctctcaagtcctttcaggccaaaggcactgaggcag 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 tgactaatgtggggtggtgtgtttctctcaagtcctttcaggccaaaggcactgaggcag 264

                                                                       
Query: 65  gagggatacaaagtttgctgcaactgctttgaatataggcagaacat-ggatttttctga 123
           ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 265 gagggatacaaagtttgctgcaactgctttgaatataggcagaacatgggttttttctga 324

                                                                       
Query: 124 ----gaagaaaagcgttatcaggtgtaacgaatatacaagagagggggaggtcataaaat 179
               |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 325 gaaggaagaaaagcattatcaggtgtaacaaatatacaagagagggggaggtcataaaat 384

                                                                       
Query: 180 ttaagcctatcaagaagagaagtaaaacctggtgagaatgatgggtagtagagaggtagt 239
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 385 ttaagcctatcaagaagagaagtaaaacctggtgagaatgatgggcagtagagaggtagt 444

                                                                       
Query: 240 tggtctgttagtggaggatgggtcactaggtattggagtcttgtttaaagtagcatttat 299
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tggtctgttagtggaggatggatcactaggtattggagtcttgtttaaagtagcatttat 504

                                                                       
Query: 300 tttaatataaattgtatttacgtacgttggatcttatttcaagtacctgtgaaaaatcaa 359
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 505 tttaatataaattgtatttacgtatgttggatcttatttcaagtacctgtgaaaaatcaa 564

                                                                       
Query: 360 ctgaccacatctaatgtttctgaaattcacaaattcaagtatttaaataaatattccaac 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ctgaccacatctaatgtttctgaaattcacaaattcaagtatttaaataaatattccaac 624

                                                                       
Query: 420 acagataatggtaagtattgaacattaatatggacttatgtttatattattaatatagta 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 acagataatggtaagtattgaacattaatatggacttatgtttatattattaatatagta 684

                                                           
Query: 480 atatcttattaaccctgaaaagccaaatctcaacaacacacaattccg 527
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atatcttattaaccctgaaaagccaaatctcaacaacacacaattccg 732


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 933
Length adjustment: 10
Effective length of query: 518
Effective length of database: 923
Effective search space:   478114
Effective search space used:   478114
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)