Query= MSMg01no299_a15.b1 MSMg01no299_a15.b1 CHROMAT_FILE:
MSMg01no299_a15.b1 PHD_FILE: MSMg01no299_a15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:35:51 2005
(639 letters)
>mm_chr5_120003312_120004350
Length = 1039
Score = 1166 bits (603), Expect = 0.0
Identities = 630/639 (98%)
Strand = Plus / Minus
Query: 1 tctctgctttctttattgatgtgctcccaggcacaggggagatgtaacagaccctcactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 839 tctctgctttctttattgatgtgctcccaggcacaggggagatgtaacagaaactcactg 780
Query: 61 gagacctagaaatcaggccaatatctcctgtaagcttccaacttgttcctggggaatctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 gagacctagaaatcaggccaatatctcctgtaagcttccaacttgttcctggggaatctg 720
Query: 121 accagacctttctggaatagctttctttatatccagagcctgcacagcagactccagggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 accagacctttctggaatagctttctttatatccagagcctgcacagcagactccagggg 660
Query: 181 aattactacactactgtgcccttaagagatgccctgaactttgcacgcaagctgtgaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 aattactacactactgtgcccttaagagatgccctgaactttgcacgcaagctgtgaact 600
Query: 241 tggctcttacatactccttgtcctgctcaggaaaacccgaggccaaggagggtaaaaagt 300
||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 599 tggctcttacagactccttgtcctgctcaggaaaacccgaggccaaggaggggaaaaagt 540
Query: 301 gagcgcttcacacattcatcttcaaagcacttaataaacgctcaagcaactaattccctc 360
|||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |
Sbjct: 539 gagcgcttcacacattcatcttcaaagcacttaataaacgctcaagtaattaattccccc 480
Query: 361 tgctccctgggaagtgggttttattgttgttgtgttggcaacaaggaaatgcctgtgctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 tgctccctgggaagtgggttttattgttgttgtgttggcaacaaggaaatgcctgtgctg 420
Query: 421 ttgatgctccatcttttcccaggcctgcagagcgagctgtgagcagtgccagaaaggcat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 ttgatgctccatcttttcccaggcctgcagagcgagctgtgagcagtgccagaaaggcat 360
Query: 481 tggcacccatggagtttctggccaggaggcctgctggctgcctgttggtgggcagaggca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tggcacccatggagtttctggccaggaggcctgctggctgcctgttggtgggcagaggca 300
Query: 541 tgcgggtggatggaaaagagctttagacaggctgggaataaagctgtactgagaactggg 600
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 299 tgcgggtggatggaaaagagctttagacagcctgggaataaagctgtactgagaactggg 240
Query: 601 agctcatgaagctgtggagatgatgggagcaccctggat 639
||||||||||||||||||||||| |||||||||||||||
Sbjct: 239 agctcatgaagctgtggagatgaggggagcaccctggat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space: 647241
Effective search space used: 647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no299_a15.g1 MSMg01no299_a15.g1 CHROMAT_FILE:
MSMg01no299_a15.g1 PHD_FILE: MSMg01no299_a15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:35:51 2005
(664 letters)
>mm_chr5_119818929_119819992
Length = 1064
Score = 1207 bits (624), Expect = 0.0
Identities = 655/666 (98%), Gaps = 2/666 (0%)
Strand = Plus / Plus
Query: 1 actaggagacaagtctgagtatctggctgaagtct--gcagattgaatgctgagtgccac 58
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 199 actaggagacaagtctgagtatctggctgaagtctgcgcagattgaatgctgagtgccac 258
Query: 59 actgaagtttggggccatgggagattgattgcattcttagcatgtccccttttgaactgt 118
||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 259 acttaagtttggggccatgggagattgattgcattcttagcatgtccccctttgaactgt 318
Query: 119 ggatgcagacacagtaatagaggcacatctttttcacatggtcttcaagtagactgaagt 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ggatgcagacacagtaatagaggcacatctttttcacatggtcttcaagtagactgaagt 378
Query: 179 aagctcgctgaacgcaaactcagaatggctttcccttcttaaacatctgcttcttgctat 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 aagctcgctgaacgcaaactcagaatggctttcccttcttaaacatctgcttcttgctat 438
Query: 239 gacgtaaacatcacttccacgttgtgagttattacctgtctagacgctttgcgcaggaga 298
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 439 gacgtaaacatcacttccacgttgtgagttattacctgtctagatgctttgcgcaggaga 498
Query: 299 tcttaatttgtccccagcatccatctcttggttgattcgcactgcccggaaatatccacc 358
||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 499 tcttaatttgtccccagcatccatctcttagttgattcgcactgttcggaaatatccacc 558
Query: 359 atggatttatttctcatgctagcctagctacacagattactgagtcaaacatttatacga 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 atggatttatttctcatgctagcctagctacacagattactgagtcaaacatttatacga 618
Query: 419 tggcattctttgaccaatatgcactgtattaaacattaaatgtagcttggggctggcagg 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tggcattctttgaccaatatgcactgtattaaacattaaatgtagcttggggctggcagg 678
Query: 479 atggctcagtgggtaaggacacttactgcaatgtctgactacctgtgttgtgacttttgg 538
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 679 atggctcagtgggtaaggacacttactgcaatgtctgactacctgtgtcgtgacttttgg 738
Query: 539 caggagactgggtgatatgcattgtctctccctcttcatgaagtcctaaacaaagaccaa 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 caggagactgggtgatatgcattgtctctccctcttcatgaagtcctaaacaaagaccaa 798
Query: 599 agttcaatagcccaaagctaaccctagggaaaaaatgggtttactagcttacttacagag 658
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 799 agttcaatagcccaaagttaaccctagggaaaaaatgggtttactaggttacttacagag 858
Query: 659 catggg 664
||||||
Sbjct: 859 catggg 864
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space: 689316
Effective search space used: 689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
