Query= MSMg01no299_k08.b1 MSMg01no299_k08.b1 CHROMAT_FILE:
MSMg01no299_k08.b1 PHD_FILE: MSMg01no299_k08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:36:37 2005
(328 letters)
>mm_chr5_148493688_148494415
Length = 728
Score = 615 bits (318), Expect = e-180
Identities = 324/326 (99%)
Strand = Plus / Plus
Query: 1 tggtgctgaagagagacaatcccccccgactccacctcccttgtccactggatccagagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggtgctgaagagagacaatcccccccgactccacctcccttgtccactggatccagagg 260
Query: 61 gacatcttcatgtgttgtcatcatctagaacattctagaatctacagcaactcacaaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gacatcttcatgtgttgtcatcatctagaacattctagaatctacagcaactcacaaata 320
Query: 121 aggtattgtaactagctagccctgcaattccagccccccttacccacattagaggaacac 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 321 aggtattgtaactagctagccctgcaattccagccccccttacccacagtagaggaacac 380
Query: 181 ataaggaggaacactgagtaggaagtcacgagcttgactccatggtccagcgtgaccatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ataaggaggaacactgagtaggaagtcacgagcttgactccatggtccagcgtgaccatg 440
Query: 241 agtcccctgcaacatgttacctaggaattttcttgggcagttgagtaagactcccctgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtcccctgcaacatgttacctaggaattttcttgggcagttgagtaagactcccctgtt 500
Query: 301 attcccagctctgacacctacaggcc 326
||||||||| ||||||||||||||||
Sbjct: 501 attcccagccctgacacctacaggcc 526
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 328
Length of database: 728
Length adjustment: 9
Effective length of query: 319
Effective length of database: 719
Effective search space: 229361
Effective search space used: 229361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no299_k08.g1 MSMg01no299_k08.g1 CHROMAT_FILE:
MSMg01no299_k08.g1 PHD_FILE: MSMg01no299_k08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:36:38 2005
(291 letters)
>mm_chr5_148658563_148659254
Length = 692
Score = 542 bits (280), Expect = e-158
Identities = 289/292 (98%), Gaps = 1/292 (0%)
Strand = Plus / Minus
Query: 1 gcacaagatctgtaaatgtttgtcttttcatttggacaatgatttttaacatgaataccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcacaagatctgtaaatgtttgtcttttcatttggacaatgatttttaacatgaataccc 262
Query: 61 ctcccccagttttcgagcagttttgggtattaa-tgtaaccaaacaaaacaaaacaaaaa 119
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 261 ctcccccagttttcgagcagttttgggtattaagtgtaaccaaacaaaacaaaacaaaaa 202
Query: 120 attttttgagacaagttttcactttgtagcccaggctggtctcaaactcacaacccaccc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attttttgagacaagttttcactttgtagcccaggctggtctcaaactcacaacccaccc 142
Query: 180 cctgctccaccttcaagtgttgagactacaggtgcatgctgccacgcctagggtggggtc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 cctgctccaccttcaagtgttgagactacaggtgcatgctgccacgcctagggtggggtc 82
Query: 240 cctcttttgagcatcttggtggcacatttgtcacagttggtaagaaagcaca 291
||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 81 cctcttttgagcatcaaggtggcacatttgtcacagttggtaagaaagcaca 30
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 692
Length adjustment: 9
Effective length of query: 282
Effective length of database: 683
Effective search space: 192606
Effective search space used: 192606
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
