Query= MSMg01no300_a12.b1 MSMg01no300_a12.b1 CHROMAT_FILE:
MSMg01no300_a12.b1 PHD_FILE: MSMg01no300_a12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:37:07 2005
(313 letters)
>mm_chr5_81519332_81520044
Length = 713
Score = 553 bits (286), Expect = e-162
Identities = 301/306 (98%)
Strand = Plus / Plus
Query: 5 gaattcatctgaataaaagattcaaatcagatggcagatttgaaaggtgacattaacctt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatctgaataaaagattcaaatcagatggcagatttgaaaggtgacattaacctt 264
Query: 65 tataaatcatttcatattctctcttatacagatgaagaatctgacacaaagaaaaattca 124
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tataaatcatttcattttctctcttatacagatgaagaatctgacacaaagaaaaattca 324
Query: 125 gtggcatgttcaaagttacacatcaaacggatgctaaaaaaacctgttcttccaacttct 184
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 325 gtggcatgttcaaagttacacatcaaacggatgctagaaaaacctgttcttccaacttct 384
Query: 185 gattcttctttccaaataccatgtcagagagactgttctgtgtagaagaaacaatcactg 244
||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 385 gattcttttttccaaataccacgtaagagagactgttctgtgtagaagaaacaatcactg 444
Query: 245 ccctaaatttatttacataagcagattcacagtcaggtcctagcttacttgagtgttacc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ccctaaatttatttacataagcagattcacagtcaggtcctagcttacttgagtgttacc 504
Query: 305 ccaaga 310
||||||
Sbjct: 505 ccaaga 510
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no300_a12.g1 MSMg01no300_a12.g1 CHROMAT_FILE:
MSMg01no300_a12.g1 PHD_FILE: MSMg01no300_a12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:37:07 2005
(285 letters)
>mm_chr5_81606753_81607438
Length = 686
Score = 543 bits (281), Expect = e-159
Identities = 284/285 (99%), Gaps = 1/285 (0%)
Strand = Plus / Minus
Query: 1 tttcaaaaggtaggggcccgctggaggaagtctcttgctgaggctcaaaagactttcttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tttcaaaaggtaggggcccgctggaggaagtctcttgctgaggctcaaaagactttcttt 426
Query: 61 gcccctgtctctctgcttactgg-tgtctggaggtgaatgtctttcctccattattcttc 119
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 425 gcccctgtctctctgcttactggctgtctggaggtgaatgtctttcctccattattcttc 366
Query: 120 cactgccatttagcatcacctaaaggaccacgaaatggaagctaccagccatgaaccact 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 cactgccatttagcatcacctaaaggaccacgaaatggaagctaccagccatgaaccact 306
Query: 180 tgaatgggactgtgaactaaataaatccttcttcattcaaagtattccccctcaggtact 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tgaatgggactgtgaactaaataaatccttcttcattcaaagtattccccctcaggtact 246
Query: 240 tatcccaaagatgaaacattgattaatgaaatagtttttcccttc 284
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tatcccaaagatgaaacattgattaatgaaatagtttttcccttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 686
Length adjustment: 9
Effective length of query: 276
Effective length of database: 677
Effective search space: 186852
Effective search space used: 186852
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
