Query= MSMg01no301_o08.b1 MSMg01no301_o08.b1 CHROMAT_FILE:
MSMg01no301_o08.b1 PHD_FILE: MSMg01no301_o08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:24 2005
(419 letters)
>mm_chr5_24888766_24889584
Length = 819
Score = 739 bits (382), Expect = 0.0
Identities = 388/390 (99%)
Strand = Plus / Minus
Query: 5 gaattcaaaatttatcttctttcctttctgatggaaacagaatatttaaggttatcaatt 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gaattcaaaatttattttctttcctttctgatggaaacagaatatttaaggttatcaatt 331
Query: 65 tacctttgattaaaactttggttaccccaagccaatttgtaactgtgtaaacctgacctc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 tacctttgattaaaactttggttaccccaagccaatttgtaactgtgtaaacctgacctc 271
Query: 125 taatgtactgtagtatgtttatacttttactttactcagaatttagttggtgtagggttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 taatgtactgtagtatgtttatacttttactttactcagaatttagttggtgtagggttt 211
Query: 185 ttgttgtatgtagttctggctggtctagaacttgctggtaaagctacaggttaccactgc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 ttgttgtatgtagttctggctggtctagaacttgctggtaaagctacaggttaccactgc 151
Query: 245 tttttgaattctgggattgcaggcctgtggggtggtttttggcttttaagcaaatgctta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 tttttgaattctgggattgcaggcctgtggggtggtttttggcttttaagcaaatgctta 91
Query: 305 cacacttgtaatagtagcttttaacactgtgtgtttgttactttcttgatagataaaatc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 cacacttgtaatagtagcttttaacactgtgtgtttgttactttcttgatagataaaatc 31
Query: 365 cctttaccgcatattttgattaacagatta 394
||||||| ||||||||||||||||||||||
Sbjct: 30 cctttactgcatattttgattaacagatta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 819
Length adjustment: 9
Effective length of query: 410
Effective length of database: 810
Effective search space: 332100
Effective search space used: 332100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no301_o08.g1 MSMg01no301_o08.g1 CHROMAT_FILE:
MSMg01no301_o08.g1 PHD_FILE: MSMg01no301_o08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:24 2005
(289 letters)
>mm_chr5_24701233_24701916
Length = 684
Score = 514 bits (266), Expect = e-150
Identities = 279/286 (97%), Gaps = 5/286 (1%)
Strand = Plus / Plus
Query: 1 ctgagtgtggttcaccatgcatgccttggcactggtatgttttataccgatgtttcttgc 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 ctgagtgtggttcaccatgcatgccttggcactggtatgttttatacagatgtttcttgc 260
Query: 61 tatccctgatgtatgtggtacgtaagactgacccagaccttgtcatgatgggtctatggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatccctgatgtatgtggtacgtaagactgacccagaccttgtcatgatgggtctatggg 320
Query: 121 ttcagcacaggggctagccttggctttagggattatttcagaaagaagtgccatataaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcagcacaggggctagccttggctttagggattatttcagaaagaagtgccatataaat 380
Query: 181 ggaagaggtacagatgatttggggtttcccagatggagaggaaggaaataagttctaggt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggaagaggtacagatgatttggggtttcccagatggagaggaaggaaataagttcta--- 437
Query: 241 aaaagaactggcaccttaaaggtccaagatgagaagaaacaggatg 286
||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 438 --aagaaatggcaccttaaaggtccaagatgagaagaaacaggatg 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 684
Length adjustment: 9
Effective length of query: 280
Effective length of database: 675
Effective search space: 189000
Effective search space used: 189000
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
