CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTGTTCACTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATTT
TCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCC
TATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCGGTTGGTGGTCTT
TTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCAT
TAGGTCCCATTTGTCAATTCTCGATCTTACAGCACATGCCATTGCTGTTC
TGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCACT
TTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGAT
CCACTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGATTTGCA
TTCTTCTACACGATAACAACCAGTTGTGCCAGCACCAATTGTTGAAAATG
CTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGTG
ACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGGT
CTACTTGTCTGTCTCTATACCAGTACCATGCAGTTTTTATCACAATTGCT
CTGTAGTAAAGCTTTAGGTCTGGCATGGTGATTCCGCCAGAAGTTCTTTT
ATCCTTGATAAGACTTTTTGCTATCCTAGGTTTTTTG

ATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCCACAGATTTCTAAAACAGCTGCAGTA
GTTTCAATCCTACAAACACCGAGGAGAATTCCCTTTTCCTTGAACCTTGA
CCAACATTGTTCTTAGATGTTTTCTCTCTTTTTAGCCATTACAACTGAGG
TAAGATGAAATTTCAAAGTTATTTCAGTTTGTATTTCAGTAATTATGAAG
GATTATGAACACTTTCAAAGATATCCCCTCTGCCATTTTAATTTCTGCTT
CTGAGAGCTCTCTGTTCACATCCTTAGCACACATTTTAATTGAATCATTG
CATATACATACTTTTCATAAATCTTATCATTATTTTTATTCATCTATGGG
AAGAAGCTTATGAATTGTTTTTACTTTCTCTTTAATATATAGTTGTACTG
GATTTTAATAATATTTATAATTAGAATGATAAAAACATTTTACTTTTATT
TTAAAAGTCAGAGAGTCACAGGCCAACTTGCCTTCCTTTAGCTGAGTCAG
TGTATTCAGAATTGGACGTTATTTTCTACGATGATCATCTGTCCCTTCCT
TTTTGTGGTCTACGAACTGCACATGGATTAACCCAGCTGGCCCAGTCCCA
CAGGAACTGAGGATAATTAATGTCCTTCTTGCTATCTCCTGCCATCACCA
GTCCATCTGTTCATGTAGAGTGAGATAGCCGTACAGGN

Query= MSMg01no302_b10.g1 MSMg01no302_b10.g1 CHROMAT_FILE:
MSMg01no302_b10.g1 PHD_FILE: MSMg01no302_b10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:39 2005
         (639 letters)



>mm_chr5_14043399_14044437
          Length = 1039

 Score = 1114 bits (576), Expect = 0.0
 Identities = 625/642 (97%), Gaps = 4/642 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccacagatttctaaaacagctgcagtagtttcaatcctacaaacaccgaggagaattccc 60
           |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Sbjct: 199 ccacagatttctaaaacagctgcagtagtttcaatcctacaaacagtgaggagaattccc 258

                                                                       
Query: 61  ttttccttgaaccttgaccaacattgttcttagatgttttctctctttttagccattaca 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 259 ttttccttgaaccttgaccaacattgttcttagatgttttctctctttttagccatgaca 318

                                                                       
Query: 121 actgaggtaagatgaaatttcaaagttatttcagtttgtatttcagtaattatgaaggat 180
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 319 actgaggtaagatgaaatttcaaagttatttcagttcgtatttcagtaattatgaaggat 378

                                                                       
Query: 181 tatgaacactttcaaagatatcccctctgccattttaatttctgcttctgagagctctct 240
           |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 379 tatgaacactttcaaagatagcccctccgccattttaatttctgcttctgagagctctct 438

                                                                       
Query: 241 gttcacatccttagcacacattttaattgaatcattgcatatacatacttttcataaatc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gttcacatccttagcacacattttaattgaatcattgcatatacatacttttcataaatc 498

                                                                       
Query: 301 ttatcattatttttattcatctatgggaagaagcttatgaattgtttttactttctcttt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ttatcattatttttattcatctatgggaagaagcttatgaattgtttttactttctcttt 558

                                                                       
Query: 361 aatatatagttgtactggattttaataatatttataattagaatgataaaaa--cat-tt 417
           |||||||||||||||||||||||| |||||||||||||||||||||||||||  ||| ||
Sbjct: 559 aatatatagttgtactggattttactaatatttataattagaatgataaaaaaacatctt 618

                                                                       
Query: 418 tacttttattttaaaagtcagagagtcacaggccaacttgccttcctttagctgagtcag 477
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 619 t-cttttattttaaaagtcagagagtcacaggccaacttgccttcctttagctgactcag 677

                                                                       
Query: 478 tgtattcagaattggacgttattttctacgatgatcatctgtcccttcctttttgtggtc 537
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 tgtattcagaattggacgttattttctacgatgatcatctgtcccttcctttttgtggtc 737

                                                                       
Query: 538 tacgaactgcacatggattaacccagctggcccagtcccacaggaactgaggataattaa 597
           |||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 738 tacgaagtgcacatggattaacccagctggcccagtccctcaggaactgaggatagttaa 797

                                                     
Query: 598 tgtccttcttgctatctcctgccatcaccagtccatctgttc 639
           | |||||||||||||||||||||| |||||||||||||||||
Sbjct: 798 tctccttcttgctatctcctgccaccaccagtccatctgttc 839


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space:   647241
Effective search space used:   647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)