Query= MSMg01no305_b17.b1 MSMg01no305_b17.b1 CHROMAT_FILE:
MSMg01no305_b17.b1 PHD_FILE: MSMg01no305_b17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:44:37 2005
(339 letters)
>mm_chr5_93302358_93303096
Length = 739
Score = 623 bits (322), Expect = 0.0
Identities = 334/338 (98%), Gaps = 1/338 (0%)
Strand = Plus / Minus
Query: 1 tgtctgatgcatcagggttaccacatggctgggtttgaaatcaagagatgtttgataatt 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 342 tgtctgatgcatcagggttaccacatggctggttttgaaatcaagagatgtttgataatt 283
Query: 61 tggctttgagttgaactgagaattttcacttgggtttgtttttatcccaaggtgtccatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 tggctttgagttgaactgagaattttcacttgggtttgtttttatcccaaggtgtccatg 223
Query: 121 tctagctattacttggatcataacatacacaacagcactcacaacacacacaacacgtac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 tctagctattacttggatcataacatacacaacagcactcacaacacacacaacacgtac 163
Query: 181 acacaccatatacacacataacacaacacaaaccatgctgagaaaaaaagaacaatgctt 240
||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct: 162 acacaccctatacacacataacacaacacaaaccatgctgag-aaaaaagaacaatactt 104
Query: 241 gtaacaacacagggttaaacgtcactgtcagctctctggccttctttggaccagaggttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 gtaacaacacagggttaaacgtcactgtcagctctctggccttctttggaccagaggttt 44
Query: 301 tcagtatactctatcttgtttgtttttagtcttttttt 338
||||||||||||||||||||||||||||||||||||||
Sbjct: 43 tcagtatactctatcttgtttgtttttagtcttttttt 6
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 739
Length adjustment: 9
Effective length of query: 330
Effective length of database: 730
Effective search space: 240900
Effective search space used: 240900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no305_b17.g1 MSMg01no305_b17.g1 CHROMAT_FILE:
MSMg01no305_b17.g1 PHD_FILE: MSMg01no305_b17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:44:37 2005
(383 letters)
>mm_chr5_93140686_93141468
Length = 783
Score = 712 bits (368), Expect = 0.0
Identities = 377/380 (99%)
Strand = Plus / Plus
Query: 1 accctgatttattgttttgctactgcacttggaacagagacagtattcactccgggctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 accctgatttattgttttgctactgcacttggaacagagacagtattcactccgggctgg 260
Query: 61 aactatagactggaaacagaggttccctgttttcattagtcaactctcaaaggatggatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aactatagactggaaacagaggttccctgttttcattagtcaactctcaaaggatggatg 320
Query: 121 gagctagcggcagattattctagggctcatgctcccttagttccttaccacccctctttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagctagcggcagattattctagggctcatgctcccttagttccttaccacccctctttc 380
Query: 181 ctggccacgttgctttccatcagcactacttattgaactaagaacactgctgattcaggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctggccacgttgctttccatcagcactacttattgaactaagaacactgctgattcaggc 440
Query: 241 caagtatttttatagtctctgggtgaaaagaatgtggaatacatgtgttgtcttggcttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caagtatttttatagtctctgggtgaaaagaatgtggaatacatgtgttgtcttggcttt 500
Query: 301 tatgacccttgaaacttgctttgcttctcttttaaccctaaagaagccacagcccacttc 360
||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 501 tatgacccttgaaacttgcattgcttctcttgaaaccctaaagaagccacagcccacttc 560
Query: 361 tttctgctttagatcagcat 380
||||||||||||||||||||
Sbjct: 561 tttctgctttagatcagcat 580
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 383
Length of database: 783
Length adjustment: 9
Effective length of query: 374
Effective length of database: 774
Effective search space: 289476
Effective search space used: 289476
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
