Query= MSMg01no305_g04.b1 MSMg01no305_g04.b1 CHROMAT_FILE:
MSMg01no305_g04.b1 PHD_FILE: MSMg01no305_g04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:45:15 2005
(426 letters)
>mm_chr5_134765811_134766638
Length = 828
Score = 661 bits (342), Expect = 0.0
Identities = 395/414 (95%), Gaps = 6/414 (1%)
Strand = Plus / Plus
Query: 15 gaattc-ctgccctcttctgacctctgtgagtagtgcacacatgtggcccatagacacat 73
|||||| |||||||||||||||||||||| | ||||||||||||||| ||||||||||||
Sbjct: 213 gaattcactgccctcttctgacctctgtgggcagtgcacacatgtggtccatagacacat 272
Query: 74 ggnggagacacaaaaactcacatacataaaataaaaataaatcttaaaaaaaaaaa--gg 131
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 273 gg-ggagacacaaaaactcacatacataaaataaaaataaatcttaaaaaaaaaaaaagg 331
Query: 132 cggtttggcggtcatccaggggtgccacaggagactgtagctcaagacaccagggctagg 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 cggtttggcggtcatccaggggtgccacaggagactgtagctcaagacaccagggctagg 391
Query: 192 cacggagctcagctgtgcttgccaatcatgcacggagctcggggttcaacctccggggga 251
|| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 catgaagctcagctgtgcttgccaatcatgcacggagctcggggttcaacctccggggga 451
Query: 252 ccgagaactcaaggtcctcctttgctgcaaagcaagtctgaggtcacatgagaccctgtc 311
| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ctgagaactcagggtcctcctttgctgcaaagcaagtctgaggtcacatgagaccctgtc 511
Query: 312 tgcataaataaatgaactaacatataaccagggtttaaattttaccagaaaaaaaaa--t 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 512 tgcataaataaatgaactaacatataaccagggtttaaattttaccagaaaaaaaaaaat 571
Query: 370 ctttataccaagattgtaagtatggacatgggtggaatgcagcatcctttctgt 423
| |||||||||||||||||||||||| ||||||| ||| |||||||||||||
Sbjct: 572 caagataccaagattgtaagtatggacacgggtggattgcggcatcctttctgt 625
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 828
Length adjustment: 9
Effective length of query: 417
Effective length of database: 819
Effective search space: 341523
Effective search space used: 341523
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no305_g04.g1 MSMg01no305_g04.g1 CHROMAT_FILE:
MSMg01no305_g04.g1 PHD_FILE: MSMg01no305_g04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:45:15 2005
(109 letters)
>mm_chr5_134931744_134932252
Length = 509
Score = 203 bits (105), Expect = 2e-57
Identities = 108/109 (99%)
Strand = Plus / Minus
Query: 1 cctggaggtggagagagaagccccccactggcctggagcccagcaggcctggatacagtt 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 309 cctggaggtggagagagaagcgccccactggcctggagcccagcaggcctggatacagtt 250
Query: 61 gggcgaatgaggtcagtggtgctgccctgccgggggaggttggtggagg 109
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 gggcgaatgaggtcagtggtgctgccctgccgggggaggttggtggagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 109
Length of database: 509
Length adjustment: 8
Effective length of query: 101
Effective length of database: 501
Effective search space: 50601
Effective search space used: 50601
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
