TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCAGGCTCCTGTCTATCATTGCTTCTTGGTGTTTCAACACATACTTG
TACAAGGGGACTTTATGTGTGTTTCTATATGCCAGTCTTGTCTGTACCAA
AACCCACATTGTTCTTTGATCCCTATCTCAGAAAGTGATGCCAATATTAA
CCCAGCTATGTGGGCCCCAAACTGGAAACAGGACTAGATATTTTCTTTTT
TTTTCTCTGATTTTAATCTATCCATCAACTAATCTAATGGGTTCTTCATC
TAAAACACATCTCCAATCCTGAAATTTCTACCCCTAGAAACAAAATATTG
GAATGACCAAGGGACATCATCTTGACTTGAATCCTTATCACCACATAATA
GCCCCAAAGTTTTCTTTCCACACAGAAGCTGAAGAGGGAAGGCTTTGCCA
ACAAAAATATAAATAATCCATGATCACCCCATGCTCATACATTGTGCTTT
CAAGGCTCTTCATGACACGAACCCTGTGTATCACGTGATCTTCATCCTGA
TAAATGATTTTTCTCTTTGCCACAATAACCTTCTTCCTGCCATGTAAATG
GTTATATACTAGGAAAATTACATCAAGTGCTTTGTATCAACTGGACATCA
TTTTTGGGTACTCCCCTTCAGGTTCTTACCCAGCCACCTTCTCATAATCC
CAGCAGGATGAAAGTTACCTCATTCCTCCAACCCCCAGAAACAGT

CCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAG
AGAAGCACCTGAAAAAATGCTCAACCTCCTTAATCATCAGGGAAATGCAA
ATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGAT
CAAAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAA
CACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAGA
TCAGTCTGGCGGTTCCTCAGAAAACTGGATATAGTACTACCGGAGGATCC
AGCAATACCTCTCCTGGGTATATATCCAGAAGATGCCCCAAGTGGTAAGA
AGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGA
AGCTGGAAGGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAGAT
GTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAAT
TTATGAAATTCCTGGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGT
GAGGTAACACATTCACAAAGGAACTCACACAATATGTACTCACTGATAAG
TGGATATTAGCCCAAAACCTAAGATACCCAAGATATAAGATACAATTTCC
TAAACACAGGAAACTCAAGAAAAATGAAGACTGAAGTGTGAA

Query= MSMg01no306_k13.b1 MSMg01no306_k13.b1 CHROMAT_FILE:
MSMg01no306_k13.b1 PHD_FILE: MSMg01no306_k13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:47:31 2005
         (696 letters)



>mm_chr5_40110667_40111763
          Length = 1097

 Score =  971 bits (502), Expect = 0.0
 Identities = 544/558 (97%), Gaps = 1/558 (0%)
 Strand = Plus / Minus

                                                                       
Query: 140 agtgatgccaatattaacccagctatgtgggccccaaactggaaacaggactagatattt 199
           |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||
Sbjct: 897 agtgatgccaatattaacccagctctgtgggccccaaactggaaacaggagtagatattt 838

                                                                       
Query: 200 tc-tttttttttctctgattttaatctatccatcaactaatctaatgggttcttcatcta 258
           || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 837 tcttttttttttctctgattttaatctatccatcaactaatctaatgggttcttcatcca 778

                                                                       
Query: 259 aaacacatctccaatcctgaaatttctacccctagaaacaaaatattggaatgaccaagg 318
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 aaacacatctccaatcctgaaatttctacccctagaaacaaaatattggaatgaccaagg 718

                                                                       
Query: 319 gacatcatcttgacttgaatccttatcaccacataatagccccaaagttttctttccaca 378
           |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 717 gacatcatcttgtcttgaatccttatcaccacatagtagccccaaagttttctttccaca 658

                                                                       
Query: 379 cagaagctgaagagggaaggctttgccaacaaaaatataaataatccatgatcaccccat 438
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 657 cagaagctgaagagggaaggctttgccaacaaaaatataaataatccataatcaccccat 598

                                                                       
Query: 439 gctcatacattgtgctttcaaggctcttcatgacacgaaccctgtgtatcacgtgatctt 498
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 597 gctcatacattgtgctttcaaggctcttcatgacacgaaccctgtgtatcatgtgatctt 538

                                                                       
Query: 499 catcctgataaatgatttttctctttgccacaataaccttcttcctgccatgtaaatggt 558
           | |||||||  |||||||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 537 cgtcctgattcatgatttttccctttgccacaataaccttcttcctgtcatgtaaatggt 478

                                                                       
Query: 559 tatatactaggaaaattacatcaagtgctttgtatcaactggacatcatttttgggtact 618
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 tatatactaggaaaattacatcaagtgctttgtatcaactggacatcatttttgggtact 418

                                                                       
Query: 619 ccccttcaggttcttacccagccaccttctcataatcccagcaggatgaaagttacctca 678
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 417 ccccttcaggttcttacccagccaccttctcatcatcccagcaggatgaaagttacctca 358

                             
Query: 679 ttcctccaacccccagaa 696
           ||||||||||||||||||
Sbjct: 357 ttcctccaacccccagaa 340


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 696
Length of database: 1097
Length adjustment: 10
Effective length of query: 686
Effective length of database: 1087
Effective search space:   745682
Effective search space used:   745682
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)