Query= MSMg01no315_b08.b1 MSMg01no315_b08.b1 CHROMAT_FILE:
MSMg01no315_b08.b1 PHD_FILE: MSMg01no315_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:27 2005
(630 letters)
>mm_chr5_79228315_79229344
Length = 1030
Score = 743 bits (384), Expect = 0.0
Identities = 405/414 (97%), Gaps = 5/414 (1%)
Strand = Plus / Minus
Query: 5 gaattccaaatattttctcatgcttatgcctattcactttctttccttccctgggaaaac 64
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 411 gaattccaaatattttttcatgcttatgcctattcactttgtttccttccctgggaaaac 352
Query: 65 ctacattttcttttgttttatgattttttgtgatagccaaagaatcactaaccatgccaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ctacattttcttttgttttatgattttttgtgatagccaaagaatcactaaccatgccaa 292
Query: 125 taataaaactattttgcacctaggtgttttctcctagaagttttattacattgagtccta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 taataaaactattttgcacctaggtgttttctcctagaagttttattacattgagtccta 232
Query: 185 tattcaaatttttaactaaaacatttattttatgtttttgagattatcatataattacat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 tattcaaatttttaactaaaacatttattttatgtttttgagattatcatataattacat 172
Query: 245 aattttacccctttcctcttcttgtccactccaaattttctcatatatcatacctgctct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 aattttacccctttcctcttcttgtccactccaaattttctcatatatcatacctgctct 112
Query: 305 ctttcaaatccatggtcttttttcataaattgttgctatattcataaatatacatacata 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 ctttcaaatccatggtcttttttcataaattgttgctatattcataaatatacatacata 52
Query: 365 tatattcctca--cccacacaaatacagtcttctcagtctatatcgtgaatgta 416
||||||||| | ||| ||||||||||||||||||||||||||||||||||
Sbjct: 51 tatattccttatt---acataaatacagtcttctcagtctatatcgtgaatgta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1030
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1020
Effective search space: 632400
Effective search space used: 632400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no315_b08.g1 MSMg01no315_b08.g1 CHROMAT_FILE:
MSMg01no315_b08.g1 PHD_FILE: MSMg01no315_b08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:27 2005
(347 letters)
>mm_chr5_79058394_79059139
Length = 746
Score = 611 bits (316), Expect = e-179
Identities = 340/348 (97%), Gaps = 3/348 (0%)
Strand = Plus / Plus
Query: 1 attccctaattcagagtgattcagtcctttctctacctcataatttatactcccaagtta 60
||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 201 attccctaattcagagtgattca-tcctttctctacctcataatttatactttaaagtta 259
Query: 61 aggagtgatcagaatgctttcctaaaatgaatatttcacctctgctctttcatgagcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aggagtgatcagaatgctttcctaaaatgaatatttcacctctgctctttcatgagcaaa 319
Query: 121 agaaaatagatgatttcccaagtaaaatgtgaaattaaaatggaaggaaatgatgaaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 agaaaatagatgatttcccaagtaaaatgtgaaattaaaatggaaggaaatgatgaaaaa 379
Query: 181 ggggcaagactatcttcagcacttactatagggcataggtactaatccccagtccactga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ggggcaagactatcttcagcacttactatagggcataggtactaatccccagtccactga 439
Query: 241 aacaaaattgggttactgtggattagagtctcacg-gttttatagcttgaccattgtcaa 299
||||||||||||| |||||||||||||| |||| | ||||||||||||||||||||||||
Sbjct: 440 aacaaaattgggtgactgtggattagagactca-gtgttttatagcttgaccattgtcaa 498
Query: 300 agcttgtttcctatattttagtagacacttggctttacaaacactgtg 347
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 agcttgtttcctatattttagtagacacttggctttacaaacactgtg 546
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 746
Length adjustment: 9
Effective length of query: 338
Effective length of database: 737
Effective search space: 249106
Effective search space used: 249106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
