CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCACATAGTATAACGGGGGAATAGAGCCTCTGACATCCACTTCCACTCA
TGTACTGTGGCACACCTGTGCTCTTTCTCAAATACATAAACATAAAAAAC
AAGAGAATATAAGACATATGTTCAAATTTTCATATGTTCAAGTGCTTTTT
TTAATCAAACGGAGTCTAAGGTAGCCAGTGGATGTTATTCTGTTACATAT
AGACAAGGTTCCATAGGAAGGCATTCAAGAACATGTGCTTGACCCCTTAA
TTATAGACTTCTGATAATGAAGTCATGACCTCATCCAGTGAGAGAACAGT
TCAGGGTCAACCTTAGTTCCAGAAAACTACGGGAGCTTCCTTATACAATA
TGAAGACAAAATGGCCTGGACCAAAGTATTATAGTAAAGAACCAAAACAA
CACTTACAGTCAAATGATTGGTATATTGATTTTCCTTTGTATATTTTCTG
ATGATTTCCAAATTTTATATGGTGAATGCAAATTACTTTGGTGAATGGTA
AAAATAATAAATAGTTCTTTGGTGTGAAGTCTTCAAGAAAGCAGGGTAGC
ATCTTAAGCCTTCATCATCCTTGCCTGGACTATTGGAGACAGTATGTGTT
TTCTGCAGTGCAAATTGTGATATATCAAAACTATTACATCTATGTGTAAT
CATTTTTGAGATGTCTCAATATCAAGATTGTA

NCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCCCACCCCTAAGTCCTTTACCCCAT
AAAAACCCCTAGCTTTCGAGCCTCAAGGTTGAATCCACTGTCTCCTGTGT
GAGATATGTTTTGACCCGGAGCTCTGCCATTAAACTGCCTGATGTGCTTG
GAGCAAGAAGGATTCTCGTGTTTCTTTGGGTGATCTCTCTCTCCCGAGAC
TAGAGTGAGGGGTCCCCAAAATGGGGTGTTACAATTCTATGAAGCCACAA
TTACTCTGGTATCTAAACCACATAAAGACCCAACAGAGGTAGAAAACTTC
AGACCAATTTCCCTTATGAATATCGATGCAAAAATACTCAATAAAATACT
CCCAAACCAAATCCAACACCAATTCATGATAAAAGTCTTGGAAAGATCAG
GAATTCAAGGCACATACATAAATATAATATAAGCAATATACAGCAAACCA
GTAGCGAACATCAAAGTAAATGGAGAGAAGCTAGAAGCAATCCCACTAAA
ATCAGGGACTAGACAAGGCTGCCCACTTTCTTCCTACCTATTCAATATAG
TACTTGAAGTCCTAGCCAGAGCAATTAGACAACAAAAGGAAGTCAAGGGG
ATACAAATTGGAAAGGAAGAAGTCAAAATATCACTATCTGCACATGATAT
GATAGTATATATAACTGACCCTAAAAATTCCACCAGAGA

Query= MSMg01no316_d21.b1 MSMg01no316_d21.b1 CHROMAT_FILE:
MSMg01no316_d21.b1 PHD_FILE: MSMg01no316_d21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:57 2005
         (686 letters)



>mm_chr5_7542772_7543857
          Length = 1086

 Score = 1236 bits (639), Expect = 0.0
 Identities = 672/683 (98%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcacatagtataacgggggaatagagcctctgacatccacttccactcatgtact 63
           ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 886 ggaattcacatagtagaaggggggaatagagcctctgacatccacttccactcatgtact 827

                                                                       
Query: 64  gtggcacacctgtgctctttctcaaatacataaacataaaaaacaagagaatataagaca 123
           |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 826 gtggcacacctgtgctctttctcacatacataaacacaaaaaacaagagaatataagaca 767

                                                                       
Query: 124 tatgttcaaattttcatatgttcaagtgctttttttaatcaaacggagtctaaggtagcc 183
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 tatgttcaaatgttcatatgttcaagtgctttttttaatcaaacggagtctaaggtagcc 707

                                                                       
Query: 184 agtggatgttattctgttacatatagacaaggttccataggaaggcattcaagaacatgt 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 agtggatgttattctgttacatatagacaaggttccataggaaggcattcaagaacatgt 647

                                                                       
Query: 244 gcttgaccccttaattatagacttctgataatgaagtcatgacctcatccagtgagagaa 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 gcttgaccccttaattatagacttctgataatgaagtcatgacctcatccagtgagagaa 587

                                                                       
Query: 304 cagttcagggtcaaccttagttccagaaaactacgggagcttccttatacaatatgaaga 363
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 586 cagttcagggtcaaccttaattccagaaaactacgggagcttccttatacaatatgacga 527

                                                                       
Query: 364 caaaatggcctggaccaaagtattatagtaaagaaccaaaacaacacttacagtcaaatg 423
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 526 caaaatggcctggaccaaagtattataataaagaaccaaaacaacacttacagtcaaatg 467

                                                                       
Query: 424 attggtatattgattttcctttgtatattttctgatgatttccaaattttatatggtgaa 483
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 attggtatagtgattttcctttgtatattttctgatgatttccaaattttatatggtgaa 407

                                                                       
Query: 484 tgcaaattactttggtgaatggtaaaaataataaatagttctttggtgtgaagtcttcaa 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 tgcaaattactttggtgaatggtaaaaataataaatagttctttggtgtgaagtcttcaa 347

                                                                       
Query: 544 gaaagcagggtagcatcttaagccttcatcatccttgcctggactattggagacagtatg 603
           |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 346 gaaagctgggtagcatcttaagccttcatcatcctcgcctggactattggagacagtatg 287

                                                                       
Query: 604 tgttttctgcagtgcaaattgtgatatatcaaaactattacatctatgtgtaatcatttt 663
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 tgttttctgcagtgcaaattgtgatatatcaaaactattacatctatgtgtaatcatttt 227

                                  
Query: 664 tgagatgtctcaatatcaagatt 686
           |||||||||||||||||||||||
Sbjct: 226 tgagatgtctcaatatcaagatt 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 686
Length of database: 1086
Length adjustment: 10
Effective length of query: 676
Effective length of database: 1076
Effective search space:   727376
Effective search space used:   727376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)