Query= MSMg01no317_a22.b1 MSMg01no317_a22.b1 CHROMAT_FILE:
MSMg01no317_a22.b1 PHD_FILE: MSMg01no317_a22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:58:59 2005
(685 letters)
>mm_chr5_58337661_58338745
Length = 1085
Score = 1164 bits (602), Expect = 0.0
Identities = 630/652 (96%), Gaps = 20/652 (3%)
Strand = Plus / Minus
Query: 34 ctatacagatcagttttcaatgagcatttttaaaagcaagtactatattatataattcca 93
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1085 ctatacagatcagttttcaatgagcatttttaaaagcaagtactatattatataattcca 1026
Query: 94 tggagagacattttctcatgtggtcatgcagtcatttgtttctagaatgaagagacaaca 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1025 tggagagacattttctcatgtggtcatgcagtcatttgtttctagaatgaagagacaaca 966
Query: 154 aagtttgagatcactctctcatctgtctctactatagtgtctgtgcacgcacacacacac 213
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 965 aagtttgagatcactctctcatctgtctctactatagtgtctgtgcacg----------- 917
Query: 214 acacacacacacacacacacacacacacacacacacacacgagttccattggatgtccat 273
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 916 ---------cacacacacacacacacacacacacacacacgagttccattggatgtccat 866
Query: 274 taaccaaaatctatttcactctcttcaaaagaatagactctatttctggtggagacaaag 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 taaccaaaatctatttcactctcttcaaaagaatagactctatttctggtggagacaaag 806
Query: 334 gatagtttccttcgataagtgttaatcgactgcagctagccaattcccgtgccaaaggga 393
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 805 gatagtttccttcgataagtgttaatcgactgcagctagtcaattcccgtgccaaaggga 746
Query: 394 ccaaccctcagaattctcatttgctataagccacattaaagatatttacctggaaattta 453
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ccaaccttcagaattctcatttgctataagccacattaaagatatttacctggaaattta 686
Query: 454 tttacttagaaaaaccagtttatcttcccagaattccttgctctctgggcagttgttaca 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tttacttagaaaaaccagtttatcttcccagaattccttgctctctgggcagttgttaca 626
Query: 514 tctctccacaggtttctgttaggtgtaccaacatttctgggtcctaaagcagaaactcct 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tctctccacaggtttctgttaggtgtaccaacatttctgggtcctaaagcagaaactcct 566
Query: 574 atttctttcctttcttttctctttgactctttatttctacatttgtccagagtttaaggt 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 atttctttcctttcttttctctttgactctttatttctacatttgtccagagtttaaggt 506
Query: 634 ttttttttttcgttctttctttcttaaagcccttgtcacccacatgtggctg 685
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttttttttttcgttctttctttcttaaagcccttgtcacccacatgtggctg 454
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 56
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1085
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1075
Effective search space: 725625
Effective search space used: 725625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no317_a22.g1 MSMg01no317_a22.g1 CHROMAT_FILE:
MSMg01no317_a22.g1 PHD_FILE: MSMg01no317_a22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:58:59 2005
(654 letters)
>mm_chr5_58167115_58168168
Length = 1054
Score = 1247 bits (645), Expect = 0.0
Identities = 651/653 (99%)
Strand = Plus / Plus
Query: 1 catcatctttgactccctccacctttcctcctttgctttattgaattgaacttgaatgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catcatctttgactccctccacctttcctcctttgctttattgaattgaacttgaatgaa 260
Query: 61 atcttttatttgtctaagtctatttctgtctggtaaggaagttgaaattgatcatgcctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcttttatttgtctaagtctatttctgtctggtaaggaagttgaaattgatcatgcctt 320
Query: 121 gactttgtgggccagcagagaaccatgacattccagagtattgattttgtggtgttaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gactttgtgggccagcagagaaccatgacattccagagtattgattttgtggtgttaaag 380
Query: 181 ggtgacagatccagtgttaaagtgccaggagagaattggttttcagattgtacaccataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggtgacagatccagtgttaaagtgccaggagagaattggttttcagattgtacaccataa 440
Query: 241 gcattcttggcttttgctgagccatgcctggctttttaaagtagaggatgaaatagtaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcattcttggcttttgctgagccatgcctggctttttaaagtagaggatgaaatagtaat 500
Query: 301 acgtagtttttactgcatacttttaaaaatattaatttctttctatatttgcttatttac 360
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 501 acgtagtttttactgcatacttttaaaaatattaatttctttctttatttgcttatttac 560
Query: 361 ttattcatttattagtgtatatatatgcatatatatatgtatgtatgtatgtatgtatct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttattcatttattagtgtatatatatgcatatatatatgtatgtatgtatgtatgtatct 620
Query: 421 atggtttttcaagcaaggtttctctgcacagatctcgatgttttggaatgcagttatttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atggtttttcaagcaaggtttctctgcacagatctcgatgttttggaatgcagttatttc 680
Query: 481 tagactggctttgaactcacagtgatcgtctgtctctgccttctgaatgctgagggtaaa 540
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 681 tagactggctttgaactcacagtgatcgtctgcctctgccttctgaatgctgagggtaaa 740
Query: 541 ggcatccaaaattatatatataatggcatgttgaaataaaatgtcacatgtgcaatgcca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ggcatccaaaattatatatataatggcatgttgaaataaaatgtcacatgtgcaatgcca 800
Query: 601 ttatttacttatctaaatgtatagagcttgaagcatgtgttcctatatgtgta 653
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ttatttacttatctaaatgtatagagcttgaagcatgtgttcctatatgtgta 853
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space: 672336
Effective search space used: 672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
