Query= MSMg01no317_o22.b1 MSMg01no317_o22.b1 CHROMAT_FILE:
MSMg01no317_o22.b1 PHD_FILE: MSMg01no317_o22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:00 2005
(296 letters)
>mm_chr5_31759781_31760476
Length = 696
Score = 551 bits (285), Expect = e-161
Identities = 294/297 (98%), Gaps = 1/297 (0%)
Strand = Plus / Minus
Query: 1 tgttcttccacaggacccaagttcactatctgggacacaaactgggaggcttacaaatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 tgttcttccacaggacccaagttcactatctgggacacaaactgggaggcttacaaatgc 283
Query: 61 catctccaggagatccaacccccatacctctatgcatacggcagtcacaaacataacacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 catctccaggagatccaacccccatacctctatgcatacggcagtcacaaacataacacc 223
Query: 121 cacacagatacaaatgcatagcataattataaataataaaaataaatcttaaaaaaaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 cacacagatacaaatgcatagcataattataaataataaaaataaatcttaaaaaaaaaa 163
Query: 181 a-ccaacacttttgaggtgctggagagatagctagctcagcagctaagagcagtgcctgc 239
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 acccaacacttttgaggtgctggagagatagctagctcagcagctaagagcagtgcctgc 103
Query: 240 tcttgcaacctatccaggtctagctcccagcatccacatcacagctcacaactgtcc 296
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 102 tcttgcaacctatccaggtctagctcccagcatccacattgcagctcacaactgtcc 46
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 696
Length adjustment: 9
Effective length of query: 287
Effective length of database: 687
Effective search space: 197169
Effective search space used: 197169
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no317_o22.g1 MSMg01no317_o22.g1 CHROMAT_FILE:
MSMg01no317_o22.g1 PHD_FILE: MSMg01no317_o22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:00 2005
(340 letters)
>mm_chr5_31898989_31899728
Length = 740
Score = 650 bits (336), Expect = 0.0
Identities = 339/340 (99%)
Strand = Plus / Minus
Query: 1 cttggaaaacaatccctaatgactcccctaaagagttcctctctgccccttgcctgagaa 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 540 cttggaaaacaatccctaatgactcccctaaagagctcctctctgccccttgcctgagaa 481
Query: 61 cttccgctgcctggaaacccagcccagagccaggtggtagccccagggaacaagcttcgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 cttccgctgcctggaaacccagcccagagccaggtggtagccccagggaacaagcttcgc 421
Query: 121 taaaagggacttacagagcgccccagcttcttccttcccggcatctgtggcgcgcggcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 taaaagggacttacagagcgccccagcttcttccttcccggcatctgtggcgcgcggcac 361
Query: 181 tttccctggaggttttctcattccctcccccgaagggtgtggatcattcaagaacaaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tttccctggaggttttctcattccctcccccgaagggtgtggatcattcaagaacaaaag 301
Query: 241 ggtgttatcagtagctgagaggttctgcgagccggaaggacttgtgggcgcagcgtgggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ggtgttatcagtagctgagaggttctgcgagccggaaggacttgtgggcgcagcgtgggt 241
Query: 301 gggaggctgggttcccccaccgctgatgcaatgcaggaag 340
||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gggaggctgggttcccccaccgctgatgcaatgcaggaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 740
Length adjustment: 9
Effective length of query: 331
Effective length of database: 731
Effective search space: 241961
Effective search space used: 241961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
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