MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-318C11
Chromosome	5 (Build37)
Map Location	99,938,416 - 99,938,758
singlet/doublet	singlet
Overlap gene	A930011G23Rik
Upstream gene	1700007G11Rik, Bmp3, Prkg2, LOC100041680, Rasgef1b
Downstream gene	LOC100040738, LOC666364, LOC100040763, LOC100040774, Hnrpd, 4930524J08Rik, Hnrpdl, Enoph1, BC062109, LOC666417, Sec31a, LOC100041797, Lin54
Link	Open Mouse BAC browser

Click to get alignment info.

name	1700007G11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75784 MGI:1916571
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bmp3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110075 MGI:88179
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prkg2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19092 MGI:108173
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041680 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041680
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 9 Proteins

name	Rasgef1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320292 MGI:2443755
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	A930011G23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319818 MGI:2442790
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	LOC100040738 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040738
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC666364 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666364
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100040763 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040763
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100040774 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040774
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Hnrpd (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11991 MGI:101947
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 4 mRNAs

name	4930524J08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75129 MGI:1922379
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	Hnrpdl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50926 MGI:1355299
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Enoph1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67870 MGI:1915120
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC062109 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231503 MGI:3041258
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666417 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666417
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Sec31a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69162 MGI:1916412
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 139 ESTs, 3 Proteins

name	LOC100041797 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041797
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs

name	Lin54 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231506 MGI:2140902
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700007G11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:66841373 GeneID:75784 MGI:1916571
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700007G11 gene transcript_id : NM_001024614.1

name	Bmp3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142383872 GeneID:110075 MGI:88179
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : bone morphogenetic protein 3 transcript_id : NM_173404.2

name	Prkg2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372298 GeneID:19092 MGI:108173
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein kinase, cGMP-dependent, type II transcript_id : NM_008926.3

name	LOC100041680 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254121 GeneID:100041680
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 9 Proteins product : similar to RNA binding protein with multiple splicing 2 transcript_id : XM_001477422.1

name	Rasgef1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22003889 GeneID:320292 MGI:2443755
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RasGEF domain family, member 1B transcript_id : NM_145839.1

name	Rasgef1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803444 GeneID:320292 MGI:2443755
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RasGEF domain family, member 1B transcript_id : NM_181318.3

name	A930011G23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149254015 GeneID:319818 MGI:2442790
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA A930011G23 gene transcript_id : XM_001475144.1

name	LOC100040763 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254017 GeneID:100040763
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040763 transcript_id : XM_001475202.1

name	LOC100040774 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254019 GeneID:100040774
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : similar to vesicle-associated membrane protein 8 transcript_id : XM_001475224.1

name	Hnrpd (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116256515 GeneID:11991 MGI:101947
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heterogeneous nuclear ribonucleoprotein D transcript_id : NM_001077267.1

name	Hnrpd (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116256517 GeneID:11991 MGI:101947
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heterogeneous nuclear ribonucleoprotein D transcript_id : NM_001077266.1

name	Hnrpd (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116256513 GeneID:11991 MGI:101947
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heterogeneous nuclear ribonucleoprotein D transcript_id : NM_007516.2

name	Hnrpd (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116256511 GeneID:11991 MGI:101947
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heterogeneous nuclear ribonucleoprotein D transcript_id : NM_001077265.1

name	4930524J08Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149254021 GeneID:75129 MGI:1922379
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : RIKEN cDNA 4930524J08 gene transcript_id : XM_001475241.1

name	Hnrpdl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892859 GeneID:50926 MGI:1355299
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heterogeneous nuclear ribonucleoprotein D-like transcript_id : NM_016690.3

name	Enoph1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802985 GeneID:67870 MGI:1915120
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : enolase-phosphatase 1 transcript_id : NM_026421.2

name	BC062109 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33469052 GeneID:231503 MGI:3041258
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC062109 transcript_id : NM_182841.1

name	Sec31a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149254025 GeneID:69162 MGI:1916412
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 139 ESTs, 3 Proteins product : SEC31 homolog A (S. cerevisiae) transcript_id : XM_132230.8

name	LOC100041797 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254126 GeneID:100041797
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs product : hypothetical protein LOC100041797 transcript_id : XM_001477560.1

name	Lin54 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142347334 GeneID:231506 MGI:2140902
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lin-54 homolog (C. elegans) transcript_id : NM_172714.2

name	1700007G11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:66841374 CCDS:CCDS19456.1 GeneID:75784 MGI:1916571
definition	codon_start : 1 product : hypothetical protein LOC75784 protein_id : NP_001019785.1

name	Bmp3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27734166 CCDS:CCDS19458.1 GeneID:110075 MGI:88179
definition	GO_component : GO:0005615 - extracellular space [Evidence IEA] GO_function : GO:0005125 - cytokine activity [Evidence IEA] GO_process : GO:0051216 - cartilage development [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0001503 - ossification [Evidence IEA]; GO:0007179 - transforming growth factor beta receptor signaling pathway [Evidence IEA] codon_start : 1 product : bone morphogenetic protein 3 protein_id : NP_775580.1

name	Prkg2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982097 CCDS:CCDS19459.1 GeneID:19092 MGI:108173
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0030553 - cGMP binding [Evidence IEA]; GO:0004692 - cGMP-dependent protein kinase activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 exception : mismatches in translation product : protein kinase, cGMP-dependent, type II protein_id : NP_032952.2

name	LOC100041680 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254122 GeneID:100041680
definition	codon_start : 1 product : similar to RNA binding protein with multiple splicing 2 protein_id : XP_001477472.1

name	Rasgef1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31044455 GeneID:320292 MGI:2443755
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0051301 - cell division [Evidence IEA]; GO:0051056 - regulation of small GTPase mediated signal transduction [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; GPI-gamma 4 product : RasGEF domain family, member 1B isoform 2 protein_id : NP_851835.1

name	Rasgef1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22003890 GeneID:320292 MGI:2443755
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0051301 - cell division [Evidence IEA]; GO:0051056 - regulation of small GTPase mediated signal transduction [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; GPI-gamma 4 product : RasGEF domain family, member 1B isoform 1 protein_id : NP_665838.1

name	A930011G23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149254016 GeneID:319818 MGI:2442790
definition	codon_start : 1 product : hypothetical protein LOC319818 protein_id : XP_001475194.1

name	LOC100040763 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254018 GeneID:100040763
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475252.1

name	LOC100040774 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254020 GeneID:100040774
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475274.1

name	Hnrpd (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116256516 GeneID:11991 MGI:101947
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0000781 - chromosome, telomeric region [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0043488 - regulation of mRNA stability [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0000723 - telomere maintenance [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform d is encoded by transcript variant 4; AU-rich element RNA-binding protein 1 product : heterogeneous nuclear ribonucleoprotein D isoform d protein_id : NP_001070735.1

name	Hnrpd (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116256518 GeneID:11991 MGI:101947
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0000781 - chromosome, telomeric region [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0043488 - regulation of mRNA stability [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0000723 - telomere maintenance [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2; AU-rich element RNA-binding protein 1 product : heterogeneous nuclear ribonucleoprotein D isoform b protein_id : NP_001070734.1

name	Hnrpd (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116256514 GeneID:11991 MGI:101947
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0000781 - chromosome, telomeric region [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0043488 - regulation of mRNA stability [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0000723 - telomere maintenance [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform c is encoded by transcript variant 3; AU-rich element RNA-binding protein 1 product : heterogeneous nuclear ribonucleoprotein D isoform c protein_id : NP_031542.2

name	Hnrpd (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116256512 GeneID:11991 MGI:101947
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0000781 - chromosome, telomeric region [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0043488 - regulation of mRNA stability [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0000723 - telomere maintenance [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1; AU-rich element RNA-binding protein 1 product : heterogeneous nuclear ribonucleoprotein D isoform a protein_id : NP_001070733.1

name	4930524J08Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149254022 GeneID:75129 MGI:1922379
definition	codon_start : 1 product : hypothetical protein LOC75129 protein_id : XP_001475291.1

name	Hnrpdl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7710036 CCDS:CCDS19460.1 GeneID:50926 MGI:1355299
definition	GO_component : GO:0005634 - nucleus [Evidence IDA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence ISS]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence ISS] [Evidence IEA] GO_process : GO:0016071 - mRNA metabolism [Evidence ISS] codon_start : 1 product : heterogeneous nuclear ribonucleoprotein D-like protein_id : NP_057899.1

name	Enoph1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312750 GeneID:67870 MGI:1915120
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : E-1 enzyme protein_id : NP_080697.1

name	BC062109 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33469053 CCDS:CCDS19461.1 GeneID:231503 MGI:3041258
definition	codon_start : 1 product : hypothetical protein LOC231503 protein_id : NP_878261.1

name	Sec31a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149254026 GeneID:69162 MGI:1916412
definition	codon_start : 1 product : SEC31-like 1 protein_id : XP_132230.8

name	LOC100041797 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254127 GeneID:100041797
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477610.1

name	Lin54 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370036 CCDS:CCDS19462.1 GeneID:231506 MGI:2140902
definition	codon_start : 1 product : lin-54 homolog protein_id : NP_766302.1

name	LOC100040738 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040738
definition	number : 1 pseudo : _no_value

name	LOC100040738 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040738
definition	number : 2 pseudo : _no_value

name	LOC100040738 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040738
definition	number : 3 pseudo : _no_value

name	LOC666364 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666364
definition	number : 1 pseudo : _no_value

name	LOC666417 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666417
definition	number : 7 pseudo : _no_value

name	LOC666417 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666417
definition	number : 6 pseudo : _no_value

name	LOC666417 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666417
definition	number : 5 pseudo : _no_value

name	LOC666417 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666417
definition	number : 4 pseudo : _no_value

name	LOC666417 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666417
definition	number : 3 pseudo : _no_value

name	LOC666417 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666417
definition	number : 2 pseudo : _no_value

name	LOC666417 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666417
definition	number : 1 pseudo : _no_value

clone name	MSMg01-478P22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-475H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164K04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-177J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161B14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-421G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-198M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-207G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212F01
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-318C11.T7 (MSMg01no318_c11.b1)	MSMg01-318C11.TJ (MSMg01no318_c11.g1)
ACC	AG438029	AG438030
length	859	727
length of high quality (start - end)	44 (72 - 115)	346 (72 - 417)
definition	CHROMAT_FILE: MSMg01no318_c11.b1 PHD_FILE: MSMg01no318_c11.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:00:16 2005	CHROMAT_FILE: MSMg01no318_c11.g1 PHD_FILE: MSMg01no318_c11.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:00:16 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGCNTTATTCCGCGGNATTC AGCCTGGTTTCAACTTATTTGATGGTTGCTTGAGTAAGTGGGTCTGTAGT AGTTAGAAAAGGTTGGACCAGCAGGATGAAGAACAGAGGGAGGAGGAACA GGGGGAGGAGGGGGTGGAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNCNNNNNNNNNNNNNNNTTTTTTT TTTCTNNNTNNNNNNNNNNNNNNNNNNTNNNTTTNNCNTNNCNCNNNNNN NNNNNNNNNNTTTTTTTTTTTTTTTCCNCCCCCCCCCCNCCNNNCCCCCC CCNCCCTTTTTTTTTTTCCTCCCCCCCCCCCCTCTTTTTCTCCTTTTCTT TTTTTTCTTTTTTTTTTTTTCTCCCNNCCTTTTTTTTNNNNNNTTTTTTN NNNNTTTTCTTTTCTTTTTTTTTTTCTCCTTCCCCCTCTTTTTTTTTTTT TTTTTCTTCTTTCTCTCTCTTTCTTTTCTTTTTTTTTCTTTTCTTTTCTC CTTCCTTCTTTTTTCCTTTTCTTTTTTTTTTCTCCTCTCTTTTTCTTTCT TTCTCTCCTCTTCTTTTTTTTTTTTTTTTCCTTCCTCTCTTTTTTCTTTC TCTCTCTCTTCNCTTCCCCCTTCTTTTCTCTTTCCTTGCCTTCTTTTCTT CCTTTTTTCTTCTTCTTTTCTTTCCTTTTTCCCNCTCTTTTTTTTTTTTC TTTTTTTTTCCTCCTCCCTTCTTTCTTTTTTTTTGTTTTTTTTCCTTTCC TTTCTTTTGCTCTNGCCTTTTCTTCTTTGTTTTCTCTCCTTTTTCTTTTC TTTTTTCTT	ACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXTTTCTGTCATCTCATGAATCATAAAAGCT AAGACAAGTGAGCAGTATGTTGATAAGAAAGTTGCAAATAACCCTGTGAT TTGCAGACAATATAAGTTTCGCTTTTTGCTTCTTTTTCAGGAGGGGCAGC ATGGAAGGAGCTAGGGTCTCATTGTATAACCTTAGTAGGTCTGGAGTGCA CTAGGTAGGCCAGGGTGGCCTTGAACTTGTAGCCATTCTCTTGTCTCTTG CCTTTGTTTCCCAAGCGCTGAGATTACAGGAATGTGACATTACACTCAGC TTGGTTTTCTGCTTCCTTTTCAAGGGACCTTGAAAGTTTGACAAAAACTT GAAGGTTAAAAATCCCCACCCCTAAGCAATGATGAGATCAGCTTCTGTTC TCACAGTTGAAACCAAAAGAAATGATCTACTTTTGTTAAATACCACAGTT ACTTTAACAAAAAAACAAAACAAGCAAACAAACAAAACCACTCCTCAGGA TTTCATGGAGGCTTTTTTGTAATTGATCAAATATAATGGTATTACAAATA TTATTTGTCCCTTCCAATATTTTTCTCATTAGCAATTAATAATTTATTGG ATACCTGCTGTTTACCACACCTTTTTACTGGGCGATGTTAGACTGATGAC CTCTGCCATAACTTCTTATGGCCCTTG
quality values	Open. Hide. 12 12 25 25 39 37 30 30 32 30 32 21 21 9 6 6 6 7 6 16 21 21 21 10 10 9 18 3 0 3 9 10 3 0 3 6 6 6 11 21 25 23 25 17 3 0 3 8 15 22 30 29 21 23 6 6 6 6 7 6 3 3 9 9 25 12 14 14 31 19 19 19 23 28 29 33 37 37 59 50 50 50 53 53 57 59 59 59 59 59 59 41 41 41 32 34 36 43 59 59 59 59 57 57 57 57 57 43 43 13 15 9 9 10 15 11 10 10 10 10 13 25 23 18 16 15 12 12 15 11 11 11 19 19 34 33 32 23 20 20 24 32 37 48 48 50 50 50 47 43 39 40 36 36 36 33 29 30 33 33 18 16 10 10 9 9 9 11 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 7 9 9 11 9 9 9 8 15 3 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 3 14 3 0 0 3 0 3 0 0 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 7 9 9 9 9 9 9 21 19 10 10 7 8 8 3 0 3 17 17 17 19 19 17 12 12 3 0 3 3 0 0 0 3 9 19 10 10 8 7 3 0 3 6 6 6 9 9 9 22 23 32 31 13 12 6 8 6 6 8 12 25 27 25 22 19 19 16 8 8 8 10 10 17 11 8 17 17 17 21 10 12 15 16 16 15 8 8 7 7 9 18 19 21 9 9 9 18 23 15 15 10 10 12 12 19 19 12 8 7 6 6 6 3 0 0 3 8 8 9 9 13 14 15 15 3 0 0 0 0 0 0 3 21 21 13 13 3 0 0 0 0 0 3 8 8 11 14 12 12 13 8 8 8 13 17 29 29 15 15 9 9 9 19 10 8 8 6 6 8 10 11 24 9 8 8 8 8 8 15 26 37 18 9 9 9 9 9 12 17 17 19 15 10 10 7 6 6 6 15 19 24 19 10 8 6 8 13 15 19 8 8 7 7 11 6 6 8 8 11 11 12 8 10 15 21 17 28 19 24 12 10 9 9 9 9 10 10 13 10 10 10 9 10 8 9 9 9 10 11 14 13 11 10 11 11 13 14 14 22 12 9 9 8 10 10 17 23 19 20 23 25 15 19 14 14 14 23 23 19 12 12 11 9 15 12 9 9 10 13 8 8 12 8 8 10 10 10 8 8 8 8 10 15 12 9 9 9 9 9 19 32 32 37 37 17 17 8 8 8 11 18 26 19 21 22 17 9 6 9 7 12 14 10 10 9 17 8 8 8 8 19 8 9 9 19 19 17 7 3 0 3 7 7 9 9 24 23 20 24 15 15 11 23 12 22 22 22 22 8 15 8 6 6 6 6 6 6 7 7 7 6 6 6 7 8 10 10 10 9 12 9 16 16 30 35 34 30 15 14 21 21 22 18 20 9 10 10 10 9 9 10 9 9 19 18 14 16 12 10 13 3 0 3 21 10 8 11 12 11 11 11 19 19 9 8 8 6 7 10 19 16 19 18 19 14 14 8 14 8 8 8 8 8 9 23 8 8 7 7 8 15 8 9 9 11 10 11 11 11 13 12 9 10 6 7 7 9 11 17 28 25 22 12 10 10 9 10 21 12 24 11 21 11 10 17 7 7 7 17 19 3 0 3 6 7 7 19 23 20 17 9 9 8 7 8 6 6 6 10 10 13 19 12 12 9 9 8 8 11 11 11 8 10 11 20 21 23 19 19 14 14 12 11 7 7 7 7	Open. Hide. 11 11 9 9 21 18 23 14 15 18 28 28 50 50 50 50 53 53 53 50 50 50 50 42 41 28 21 10 8 8 10 8 8 14 9 10 10 24 19 34 34 43 48 47 53 50 50 50 53 53 53 53 53 57 44 59 39 42 48 24 30 17 15 15 27 21 41 41 41 41 47 59 68 68 51 51 50 50 50 51 51 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 50 50 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 51 50 50 50 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 43 47 35 43 43 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 59 59 59 57 57 57 57 57 57 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 44 44 18 9 9 8 8 6 9 10 15 21 9 9 9 11 12 15 33 41 59 59 59 59 59 53 57 57 57 57 57 59 59 59 59 59 59 59 59 59 59 59 57 68 68 68 57 57 54 59 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 68 68 68 68 68 68 59 59 48 48 48 57 57 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 57 59 59 59 59 59 59 59 59 59 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 59 59 57 54 54 54 68 68 68 68 68 68 68 68 68 57 57 59 59 59 59 59 59 57 57 57 57 57 57 59 59 59 59 59 59 59 59 59 59 59 59 44 37 29 29 37 37 37 41 47 50 50 48 48 59 59 59 59 57 57 57 57 57 57 57 59 59 59 48 48 42 42 42 48 48 59 59 59 59 59 57 57 57 57 57 57 47 50 47 50 50 53 53 57 59 59 59 59 59 59 59 59 47 47 42 41 39 39 44 37 37 44 59 47 47 32 19 12 16 17 28 36 47 39 39 39 59 59 59 59 59 39 36 33 30 28 36 43 40 40 39 41 41 41 59 48 48 43 40 40 40 39 37 37 32 29 29 32 37 59 32 29 29 32 32 29 29 37 59 59 44 37 37 41 37 29 28 29 29 28 26 24 20

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no318_c11.g1 MSMg01no318_c11.g1 CHROMAT_FILE:
MSMg01no318_c11.g1 PHD_FILE: MSMg01no318_c11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:16 2005
         (346 letters)



>mm_chr5_99938216_99938961
          Length = 746

 Score =  632 bits (327), Expect = 0.0
 Identities = 339/343 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttctgtcatctcatgaatcataaaagctaagacaagtgagcagtatgttgataagaaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttctgtcatctcatgaatcataaaagctaagacaagtgagcagtatgttgataagaaag 260

                                                                       
Query: 61  ttgcaaataaccctgtgatttgcagacaatataagtttcgctttttgcttctttttcagg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgcaaataaccctgtgatttgcagacaatataagtttcgctttttgcttctttttcagg 320

                                                                       
Query: 121 aggggcagcatggaaggagctagggtctcattgtataaccttagtaggtctggagtgcac 180
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 321 aggggcagcatggaaggagctagggactcattgtataaccttagtaggtctggagtgcac 380

                                                                       
Query: 181 taggtaggccagggtggccttgaacttgtagccattctcttgtctcttgcctttgtttcc 240
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 381 taggtaggccagggtggccttgaacttgtagccattctcttgtttcttgcctttgtttcc 440

                                                                       
Query: 241 caagcgctgagattacaggaatgtgacattacactcagcttggttttctgcttccttttc 300
           ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caagcactgagattacagggatgtgacattacactcagcttggttttctgcttccttttc 500

                                                      
Query: 301 aagggaccttgaaagtttgacaaaaacttgaaggttaaaaatc 343
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagggaccttgaaagtttgacaaaaacttgaaggttaaaaatc 543


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space:   248369
Effective search space used:   248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information