Query= MSMg01no319_h03.b1 MSMg01no319_h03.b1 CHROMAT_FILE:
MSMg01no319_h03.b1 PHD_FILE: MSMg01no319_h03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:47 2005
(298 letters)
>mm_chr5_132843332_132844032
Length = 701
Score = 509 bits (263), Expect = e-148
Identities = 291/301 (96%), Gaps = 4/301 (1%)
Strand = Plus / Plus
Query: 1 acaataaacactctatctgtatttctatccacacaaacacatatacgaacacacacatat 60
||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||
Sbjct: 201 acaataaacactctatctgcatttctatccacacaaacacatatgtgaacacacacacat 260
Query: 61 --taaagatcttctacaggtaaaggaataccgaaatgcaggggcacgga-gatttatgta 117
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 actaaagatcttctacaggtaaaggaataccgaaatgcaggggcacggaagatttatgta 320
Query: 118 tgttggaggattatagacttacaaggttgtctcaaaaataaataaacaaataagcaaggg 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgttggaggattatagacttacaaggttgtctcaaaaataaataaacaaataagcaaggg 380
Query: 178 aaagtgctatctcaaactcagttaacctttggaatccattttacacaatacttactgagg 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaagtgctatctcaaactcagttaacctttggaatccattttacacaatacttactgagg 440
Query: 238 cctgggcacaccatcatagattttttatttaattagtctggaatgcagcctgggttaaaa 297
|||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 441 cctgggtacaccatcagagattttt-atttaattagtctggaatgcagcctgggttaaaa 499
Query: 298 a 298
|
Sbjct: 500 a 500
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 701
Length adjustment: 9
Effective length of query: 289
Effective length of database: 692
Effective search space: 199988
Effective search space used: 199988
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no319_h03.g1 MSMg01no319_h03.g1 CHROMAT_FILE:
MSMg01no319_h03.g1 PHD_FILE: MSMg01no319_h03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:47 2005
(288 letters)
>mm_chr5_132980281_132980969
Length = 689
Score = 536 bits (277), Expect = e-157
Identities = 283/285 (99%), Gaps = 1/285 (0%)
Strand = Plus / Minus
Query: 4 gcagctctgtcttcaggtctctgccttgattttctaccctgatttccctctgtgaactgt 63
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 641 gcagctctgtcttcaggtctctgccttgatttcctaccctgatttccctctgtgaactgt 582
Query: 64 aacaaggaagtaagggatgaaataaagtctttacttccctaagttgcttttggtcgatat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 aacaaggaagtaagggatgaaataaagtctttacttccctaagttgcttttggtcgatat 522
Query: 124 ttgtcaaagccacagaatgaaaggagactatgaagtgat-acactgttcttattcccagc 182
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 521 ttgtcaaagccacagaatgaaaggagactatgaagtgataacactgttcttattcccagc 462
Query: 183 atacaaccttcatctctgtgttctgcttgagggcagggtgggtgtcctcgctatgtccgt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 atacaaccttcatctctgtgttctgcttgagggcagggtgggtgtcctcgctatgtccgt 402
Query: 243 ggaccctgtacctcaggtgtagtttgattgcctggttgagcatgg 287
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 ggaccctgtacctcaggtgtagtttgattgcctggttgagcatgg 357
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 689
Length adjustment: 9
Effective length of query: 279
Effective length of database: 680
Effective search space: 189720
Effective search space used: 189720
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
