Query= MSMg01no320_h02.b1 MSMg01no320_h02.b1 CHROMAT_FILE:
MSMg01no320_h02.b1 PHD_FILE: MSMg01no320_h02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:57 2005
(688 letters)
>mm_chr5_122068669_122069756
Length = 1088
Score = 1247 bits (645), Expect = 0.0
Identities = 656/660 (99%)
Strand = Plus / Minus
Query: 29 tggggctagcctcgcttctatgctaggcaagaattcaccaacagaactacatctctgacc 88
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1088 tggggctagcctcgcttctatgctaggcaagaattcaccaacagaactacatctctgacc 1029
Query: 89 tgagaccttgcttccattaaaacaacagacagacagggactgagagtttaggggtagaac 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1028 tgagaccttgcttccattaaaacaacagacagacagggactgagagtttaggggtagaac 969
Query: 149 tgtacttagcaaggagagagggagaaagagacagaagaaaggagaggaaagggaagagga 208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 968 tgtacttagcaaggagagagggagaaagagacagaagaaaggagaggaaagggaagagga 909
Query: 209 caggaggagacagaaagaaactaaaagtagagctagaaatggctgctgtcgtaggcagag 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 908 caggaggagacagaaagaaactaaaagtagagctagaaatggctgctgtcgtaggcagag 849
Query: 269 cagctgcccaggtggacagcggcttcccggcaccgatgcctgtgcagtagctgtggcaga 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 cagctgcccaggtggacagcggcttcccggcaccgatgcctgtgcagtagctgtggcaga 789
Query: 329 cactgcacatgtacctgagtctagaagaaatatgtaaaaccacactcttgtggcacacag 388
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 788 cactggacatgtacctgagtctagaagaaataagtaaaaccacactcttgtggcacacag 729
Query: 389 tgaggacatgctgacactgcaaaccatccaagaagacatcaagtgttcagagtgactgaa 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 tgaggacatgctgacactgcaaaccatccaagaagacatcaagtgttcagagtgactgaa 669
Query: 449 gctccatccaaaatccagttgggataaaggcttggacgaccgccacacttggacgtgacc 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 gctccatccaaaatccagttgggataaaggcttggacgaccgccacacttggacgtgacc 609
Query: 509 tcctgtcttttctggcgtgagatcaagctgtacccctggctgcctttaaactcccaatct 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 tcctgtcttttctggcgtgagatcaagctgtacccctggctgcctttaaactcccaatct 549
Query: 569 tccgatctttagctcanagtacagaatgatcggtgtggccagtcacctgctcggagtggg 628
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 tccgatctttagctcaaagtacagaatgatcggtgtggccagtcacctgctcggagtggg 489
Query: 629 ccccggtggccggacgagcccaccggtagcagcgccgccaccgcctcagcagcggcagcc 688
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 488 ccccggtggccggacgagcccaccggtggcagcgccgccaccgcctcagcagcggcagcc 429
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 688
Length of database: 1088
Length adjustment: 10
Effective length of query: 678
Effective length of database: 1078
Effective search space: 730884
Effective search space used: 730884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no320_h02.g1 MSMg01no320_h02.g1 CHROMAT_FILE:
MSMg01no320_h02.g1 PHD_FILE: MSMg01no320_h02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:57 2005
(169 letters)
>mm_chr5_121902971_121903540
Length = 570
Score = 250 bits (129), Expect = 5e-71
Identities = 160/177 (90%), Gaps = 15/177 (8%)
Strand = Plus / Plus
Query: 1 gctagctgggaaaactgg-aggctggtctctgagttggaagccaaacctcatccatatac 59
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gctagctgggaaaactggcaggctggtctctgagttggaagccaaacctcatccatatac 260
Query: 60 tgtgttcctggaactagtaccttccatatctaagttccatccttattttt-------agg 112
|||||||||||||||||||||||||| ||||||||||| |||||| |||
Sbjct: 261 tgtgttcctggaactagtaccttccacatctaagttccgtcctta-----gcacccaagg 315
Query: 113 gggaaagcacaactttaatcacaccactccaa-ggc-aagggtggcgaacctgagtt 167
|||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 316 gggaaagcacaactttaatcacaccactccaaaggccaagggtggcgaacctgagtt 372
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 169
Length of database: 570
Length adjustment: 8
Effective length of query: 161
Effective length of database: 562
Effective search space: 90482
Effective search space used: 90482
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
