Query= MSMg01no320_k22.b1 MSMg01no320_k22.b1 CHROMAT_FILE:
MSMg01no320_k22.b1 PHD_FILE: MSMg01no320_k22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:03:15 2005
(223 letters)
>mm_chr5_65895674_65896295
Length = 622
Score = 381 bits (197), Expect = e-110
Identities = 215/221 (97%), Gaps = 1/221 (0%)
Strand = Plus / Minus
Query: 1 catccagtaaagaaaggcgagggagcaaggacactcacagagaaaagacactctgcacac 60
|||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 420 catccagtaaag-aaggcgagggagcgaggacactcacagagaaaagacgctctgcacag 362
Query: 61 ctgagctgggggctctgggagccgaagttcaggttccccttgggggctgggacttttaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctgagctgggggctctgggagccgaagttcaggttccccttgggggctgggacttttaaa 302
Query: 121 gtctctgaggggaggttgtccacccctcctttagaggctggtcagtttgaagagagacag 180
||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 301 gtctctgagaggaggttgtccacccctcctttagaggttggtcagtttgaagagagacag 242
Query: 181 gatgactgactggtccacaactgttgtgaacacatcagatc 221
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gatgactgactggtccacaactgttgtgaacacatcagatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 223
Length of database: 622
Length adjustment: 9
Effective length of query: 214
Effective length of database: 613
Effective search space: 131182
Effective search space used: 131182
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no320_k22.g1 MSMg01no320_k22.g1 CHROMAT_FILE:
MSMg01no320_k22.g1 PHD_FILE: MSMg01no320_k22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:03:15 2005
(146 letters)
>mm_chr5_65721565_65722110
Length = 546
Score = 267 bits (138), Expect = 2e-76
Identities = 144/146 (98%)
Strand = Plus / Plus
Query: 1 ttcgtactataatttggcctaccaggtatgaaatatataggtacaagtttattctttatt 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcgtactagaatttggcctaccaggtatgaaatatataggtacaagtttattctttatt 260
Query: 61 catccctggtttctatcaggtatgaaatgtaaacatccaagtttattctttattattttg 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catccctgttttctatcaggtatgaaatgtaaacatccaagtttattctttattattttg 320
Query: 121 catgagggctatctggcctcttttgt 146
||||||||||||||||||||||||||
Sbjct: 321 catgagggctatctggcctcttttgt 346
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 146
Length of database: 546
Length adjustment: 8
Effective length of query: 138
Effective length of database: 538
Effective search space: 74244
Effective search space used: 74244
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
