Query= MSMg01no322_a10.b1 MSMg01no322_a10.b1 CHROMAT_FILE:
MSMg01no322_a10.b1 PHD_FILE: MSMg01no322_a10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:54 2005
(239 letters)
>mm_chr5_24504686_24505324
Length = 639
Score = 393 bits (203), Expect = e-114
Identities = 230/239 (96%)
Strand = Plus / Minus
Query: 1 cattcttaagttcctcaacaaagactccaatgctcccatggggtaaattcagagctaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 cattcttaagttcctcaacaaagactccaatgctcccatggggtaaattcagagctaggc 380
Query: 61 tgcctcagtgagttctggtcccagcatacagaggaagtatctgccctcacctggaaggat 120
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 379 tgcctcaatgagttctggtcccagcgtacagaggaagtatctgccctcacctggaaggat 320
Query: 121 gcaaatcaaggttttcaaggttgactcttatgcctttaaactttcaggcctgaattttta 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 319 gcaaatcaaggttttcaaggttgactcttatgcctttaaactttcaggcctgaaggtcaa 260
Query: 181 aggtcagtacgagaatgcagactcttgcctattctctttcttccaaggaactctctgag 239
|||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 259 aggtcagtgtgagaatgcagactcttgcctattctctttcttccaaggaactcactgag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no322_a10.g1 MSMg01no322_a10.g1 CHROMAT_FILE:
MSMg01no322_a10.g1 PHD_FILE: MSMg01no322_a10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:54 2005
(294 letters)
>mm_chr5_24346854_24347547
Length = 694
Score = 505 bits (261), Expect = e-147
Identities = 278/291 (95%), Gaps = 12/291 (4%)
Strand = Plus / Plus
Query: 4 gttctactgccagactctccacttgcttctccactcctcagtggtccctgtcaaacgcac 63
||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 216 gttctactgccagactctccact------------cctcagtggtccctgtcaaacgcac 263
Query: 64 attttctggagacagttacatctttcaaacagcactaaagatgaacatgacagtcccctg 123
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 264 attttctggagacagttacatctttcaaacagcactaaagatgaacgtgacagtcccctg 323
Query: 124 ttccggtcggtcaaaaacaataaagcctcaccctgcagcgtggttaagttcaaatgtcct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttccggtcggtcaaaaacaataaagcctcaccctgcagcgtggttaagttcaaatgtcct 383
Query: 184 gtatcacacgatggactgaatactactgtctggacaccgcgttccctccccaccccaccc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gtatcacacgatggactgaatactactgtctggacaccgcgttccctccccaccccaccc 443
Query: 244 aggaccacctctattcggcaaaaaggtgattactaggaacaactttaaatg 294
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aggaccacctctattcggcaaaaaggtgattactaggaacaactttaaatg 494
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
